RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 LPXNO60711 386 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 ZC3H11AO75152 810 aaKnown RBP eCLIP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 IL18RAPO95256 599 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FGFR1OPO95684 399 aaKnown RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 POMCP01189 267 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 RB1P06400 928 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FGFR1P11362 822 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 ATF7P17544 494 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 PROZP22891 400 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 AKAP5P24588 427 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 CTNNB1P35222 781 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 MLH1P40692 756 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 CASP5P51878 434 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 KRT17Q04695 432 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 EHHADHQ08426 723 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 STK4Q13043 487 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 UBXN11Q5T124 520 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 EEF1DP3Q658K8 133 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 EPM2AIP1Q7L775 607 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 TMCO2Q7Z6W1 182 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 GPD1LQ8N335 351 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 SMG8Q8ND04 991 aaKnown RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FBXO22Q8NEZ5 403 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 SCFD1Q8WVM8 642 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 HPS3Q969F9 1004 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 PPP2R3CQ969Q6 453 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF689Q96CS4 500 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FAM212AQ96EL1 285 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM169Q96HH4 297 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF558Q96NG5 402 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FNBP1Q96RU3 617 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FIZ1Q96SL8 496 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 GAD1Q99259 594 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 GAS2L1Q99501 681 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 C11orf84Q9BUA3 381 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 STRA6Q9BX79 667 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 NKX2-4Q9H2Z4 354 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 CLSTN2Q9H4D0 955 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF576Q9H609 170 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 PLEKHA5Q9HAU0 1116 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 PTPRHQ9HD43 1115 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 KIAA1468Q9P260 1216 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 PUF60Q9UHX1 559 aaKnown RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 FRMD4BQ9Y2L6 1034 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 HES2Q9Y543 173 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 COL4A4P53420 1690 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-206ENST00000462613 LINC01553A4QN01 128 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF233A6NK53 670 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TTLL13PA6NNM8 815 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 EXTL3O43909 919 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 EXOC3O60645 756 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 OFD1O75665 1012 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 LETM1O95202 739 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 ALDH2P05091 517 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 PBX2P40425 430 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 SCNN1GP51170 649 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TAP1Q03518 808 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 LRRC63Q05C16 580 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 KCNA1Q09470 495 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TUSC3Q13454 348 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 MYBPC2Q14324 1141 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 PTPROQ16827 1216 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TPD52L1Q16890 204 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 CLLU1OSQ5K130 101 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 CCDC183Q5T5S1 534 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 SASS6Q6UVJ0 657 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 AGMOQ6ZNB7 445 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 NT5DC4Q86YG4 428 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM192Q8IY95 271 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 XXYLT1Q8NBI6 393 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 KIAA0895Q8NCT3 520 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 SP7Q8TDD2 431 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 P2RX5Q93086 422 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 DHTKD1Q96HY7 919 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 ZBTB45Q96K62 511 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 UROC1Q96N76 676 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 CASD1Q96PB1 797 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 FAM213AQ9BRX8 229 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM175Q9BSA9 504 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 COLEC11Q9BWP8 271 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 ASB7Q9H672 318 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 TBC1D13Q9NVG8 400 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 RBAKQ9NYW8 714 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 KLK14Q9P0G3 267 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 MTUS1Q9ULD2 1270 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 UBQLN1Q9UMX0 589 aaKnown RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 MAPK8IP1Q9UQF2 711 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 USP20Q9Y2K6 914 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 FAN1Q9Y2M0 1017 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 YBX2Q9Y2T7 364 aaKnown RBP6.94□□□□□ -1.3
SF3B1-206ENST00000462613 STYXL1Q9Y6J8 313 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 MYH10P35580 1976 aa6.94□□□□□ -1.3
SF3B1-206ENST00000462613 ARHGEF37A1IGU5 675 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 LCHNA4D1U4 455 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ANKRD63C9JTQ0 380 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 BIN1O00499 593 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms