RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SYCP3Q8IZU3 236 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 CCDC155Q8N6L0 562 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 TRAPPC12Q8WVT3 735 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 CNOT6LQ96LI5 555 aaKnown RBP12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 MKNK1Q9BUB5 465 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 CLDND1Q9NY35 253 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 SUCLA2Q9P2R7 463 aaPredicted RBP12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 ADGRA3Q8IWK6 1321 aa12.82□□□□□ -0.36
AC009404.1-202ENST00000439955 ABHD14A-ACY1A0A1B0GW23 586 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 LRRIQ4A6NIV6 560 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 GFRA3O60609 400 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 PIGRP01833 764 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 CXCL10P02778 98 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 NR3C1P04150 777 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 GNAT1P11488 350 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 CKBP12277 381 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 NR2F2P24468 414 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 ADAM17P78536 824 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 KCNA1Q09470 495 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 LAMTOR4Q0VGL1 99 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 STRN3Q13033 797 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 ADAM9Q13443 819 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 IKBKEQ14164 716 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 KRT31Q15323 416 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 PTPROQ16827 1216 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 EPC2Q52LR7 807 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 MARCH8Q5T0T0 291 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 LRRC71Q8N4P6 559 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 DEPTORQ8TB45 409 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 LMBR1Q8WVP7 490 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 PRPF31Q8WWY3 499 aaKnown RBP12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 PABPC5Q96DU9 382 aaKnown RBP12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 MAP7D2Q96T17 732 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 XPO4Q9C0E2 1151 aaKnown RBP12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 AGPAT3Q9NRZ7 376 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 DMAC2Q9NW81 257 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 PRKAG3Q9UGI9 489 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 KAT6AQ92794 2004 aa12.81□□□□□ -0.36
AC009404.1-202ENST00000439955 TET1Q8NFU7 2136 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 SMIM35A0A1B0GVV1 85 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 KIAA0391O15091 583 aaKnown RBP12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 MAPK13O15264 365 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 CSPG5O95196 566 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 RPLP2P05387 115 aaKnown RBP12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 CLCN3P51790 818 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 COPB1P53618 953 aaKnown RBP12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 PTPN5P54829 565 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 IGBP1P78318 339 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 PPP2R3AQ06190 1150 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 DRP2Q13474 957 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 GPM6BQ13491 265 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 FRMD5Q7Z6J6 570 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 ZNF410Q86VK4 478 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 SESTD1Q86VW0 696 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 KIFC3Q9BVG8 833 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 METTL14Q9HCE5 456 aaKnown RBP12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 INSL6Q9Y581 213 aa12.8□□□□□ -0.36
AC009404.1-202ENST00000439955 LGALS16A8MUM7 142 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 K7ERI5 159 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 GARTP22102 1010 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 LTBRP36941 435 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 PHKA2P46019 1235 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 PTENP60484 403 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 TCF15Q12870 199 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 NR1I3Q14994 352 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 ZPBP2Q6X784 338 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 TAS1R3Q7RTX0 852 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 RPAINQ86UA6 219 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 RHPN2Q8IUC4 686 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 KSR1Q8IVT5 923 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 EDAQ92838 391 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 WNT8BQ93098 351 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 SETD4Q9NVD3 440 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 STYXL1Q9Y6J8 313 aa12.79□□□□□ -0.36
AC009404.1-202ENST00000439955 EVPLQ92817 2033 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 C17orf102A2RUQ5 167 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 TMEM221A6NGB7 291 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 M0R296 226 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 N4BP3O15049 544 aa12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 EPB41P11171 864 aaKnown RBP12.78□□□□□ -0.36
AC009404.1-202ENST00000439955 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms