RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 FBXO38Q6PIJ6 1188 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 CD302Q8IX05 232 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 CCNYQ8ND76 341 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 MGARPQ8TDB4 240 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 APEX2Q9UBZ4 518 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 SNX12Q9UMY4 172 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 A0A0G2JLL6 359 aaPredicted RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 BUB1BO60566 1050 aaPredicted RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 MED24O75448 989 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 PGK2P07205 417 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 UCHL3P15374 230 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 PRMT2P55345 433 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 PRRT2Q7Z6L0 340 aaPredicted RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 LRRC71Q8N4P6 559 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 FBXL13Q8NEE6 735 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 URGCPQ8TCY9 931 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 MTMR8Q96EF0 704 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 ZNF560Q96MR9 790 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 MTIF3Q9H2K0 278 aaKnown RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 SLITRK6Q9H5Y7 841 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 BLOC1S4Q9NUP1 217 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 LRP5O75197 1615 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 TIAM2Q8IVF5 1701 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 A0A087X0B3 334 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 PODXLO00592 558 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 MEIS2O14770 477 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 SART1O43290 800 aaKnown RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 CABYRO75952 493 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 ARP10275 920 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 KCNA3P22001 575 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 GPC3P51654 580 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 EIF3BP55884 814 aaKnown RBP11.36□□□□□ -0.59
NOD1-206ENST00000434755 NAB2Q15742 525 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 ZNF507Q8TCN5 953 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 MICAL1Q8TDZ2 1067 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 ATP8B4Q8TF62 1192 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 VIPAS39Q9H9C1 493 aa11.36□□□□□ -0.59
NOD1-206ENST00000434755 LRRD1A4D1F6 860 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 ADORA2AP29274 412 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 DRAP1Q14919 205 aaPredicted RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 OSBPL9Q96SU4 736 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 POLIQ9UNA4 740 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 GOLGA4Q13439 2230 aaKnown RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 ZC3H11AO75152 810 aaKnown RBP eCLIP11.35□□□□□ -0.59
NOD1-206ENST00000434755 EVX2Q03828 476 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 DUOXA2Q1HG44 320 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 HAUS1Q96CS2 278 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 SEMA6BQ9H3T3 888 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 CPA4Q9UI42 421 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 FNDC3AQ9Y2H6 1198 aaKnown RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 MAD1L1Q9Y6D9 718 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 A6NJR5 290 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 STAMBPO95630 424 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 CTNNA1P35221 906 aaKnown RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 ITIH3Q06033 890 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 TRIP13Q15645 432 aaPredicted RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 CC2D1AQ6P1N0 951 aaPredicted RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 TRIM59Q8IWR1 403 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 ANKRD42Q8N9B4 389 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 HNRNPLLQ8WVV9 542 aaKnown RBP11.35□□□□□ -0.59
NOD1-206ENST00000434755 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 P3H4Q92791 437 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 EMSYQ7Z589 1322 aa11.35□□□□□ -0.59
NOD1-206ENST00000434755 HEXIM1O94992 359 aaKnown RBP11.34□□□□□ -0.59
NOD1-206ENST00000434755 SAT1P21673 171 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 TAP1Q03518 808 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 PCBP1Q15365 356 aaKnown RBP eCLIP11.34□□□□□ -0.59
NOD1-206ENST00000434755 DCAF4L1Q3SXM0 396 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 CEP85LQ5SZL2 805 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 PALM2Q8IXS6 379 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 FRMPD4Q14CM0 1322 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 KLRC4O43908 158 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 ZNF189O75820 626 aaPredicted RBP11.34□□□□□ -0.59
NOD1-206ENST00000434755 PNMA6AP0CW24 399 aaPredicted RBP11.34□□□□□ -0.59
NOD1-206ENST00000434755 NNTQ13423 1086 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 SLMAPQ14BN4 828 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 CCDC6Q16204 474 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 MEA1Q16626 185 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 KLHDC7AQ5VTJ3 777 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 C4orf50Q6ZRC1 276 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 WDR24Q96S15 920 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 C11orf70Q9BRQ4 267 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 ADAM22Q9P0K1 906 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 UVRAGQ9P2Y5 699 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 STRIP2Q9ULQ0 834 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 MYH7P12883 1935 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 MAPK13O15264 365 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 PALMO75781 387 aa11.34□□□□□ -0.59
NOD1-206ENST00000434755 CYP2C9P11712 490 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms