RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 SKIP12755 728 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 GUCY2CP25092 1073 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
PTCH1-208ENST00000430669 ANKRD42Q8N9B4 389 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 PLEKHA4Q9H4M7 779 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 BASP1P80723 227 aaKnown RBP12.28□□□□□ -0.44
PTCH1-208ENST00000430669 ITKQ08881 620 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 CENPPQ6IPU0 288 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 KIAA1841Q6NSI8 718 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 SPATA4Q8NEY3 305 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTCH1-208ENST00000430669 AGPAT3Q9NRZ7 376 aa12.28□□□□□ -0.44
PTCH1-208ENST00000430669 GARTP22102 1010 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 KLHL38Q2WGJ6 581 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 CC2D1AQ6P1N0 951 aaPredicted RBP12.27□□□□□ -0.44
PTCH1-208ENST00000430669 ACTN1P12814 892 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 PPARGP37231 505 aaPredicted RBP12.27□□□□□ -0.44
PTCH1-208ENST00000430669 PSMC1P62191 440 aaKnown RBP12.27□□□□□ -0.44
PTCH1-208ENST00000430669 PLCB4Q15147 1175 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.44
PTCH1-208ENST00000430669 THNSL1Q8IYQ7 743 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 KIF12Q96FN5 646 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 PLAGL2Q9UPG8 496 aa12.27□□□□□ -0.44
PTCH1-208ENST00000430669 Q3C1V9 767 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 ATG16L1Q676U5 607 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 CD302Q8IX05 232 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
PTCH1-208ENST00000430669 BCORQ6W2J9 1755 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 POC1B-GALNT4F8VUJ3 575 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-208ENST00000430669 GTF2A1P52655 376 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-208ENST00000430669 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 CYP11B2P19099 503 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 NFIAQ12857 509 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 KCNH4Q9UQ05 1017 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 PPP2R5DQ14738 602 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 TMEM119Q4V9L6 283 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 CCDC137Q6PK04 289 aaKnown RBP12.27□□□□□ -0.45
PTCH1-208ENST00000430669 SLC35G2Q8TBE7 412 aa12.27□□□□□ -0.45
PTCH1-208ENST00000430669 SDC4P31431 198 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 SLC8A1P32418 973 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 FOXR2Q6PJQ5 311 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 RAB44Q7Z6P3 723 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 TRAIPQ9BWF2 469 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 TXLNGQ9NUQ3 528 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 CYP3A4P08684 503 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ZNF18P17022 549 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 SH2D4BQ5SQS7 431 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 KLC3Q6P597 504 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 A0A087WUV0 522 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 PLA2G6O60733 806 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ZMYND10O75800 440 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 SEC31AO94979 1220 aaKnown RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ABL1P00519 1130 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ACTR2P61160 394 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ZNF484Q5JVG2 852 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 PASD1Q8IV76 773 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 DNAAF3Q8N9W5 541 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 CCNYQ8ND76 341 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 CHP1Q99653 195 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 RANBP17Q9H2T7 1088 aaKnown RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 CYP3A7-CYP3A51PA0A087WV96 503 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 SMAPO00193 183 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 CYP3A7P24462 503 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 GRIN1Q05586 938 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 NYAP1Q6ZVC0 841 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 FRMD8P1Q9BZ68 369 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ZFYVE28Q9HCC9 887 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 FAN1Q9Y2M0 1017 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 USH1CQ9Y6N9 552 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 DYNLT1P63172 113 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 DMTNQ08495 405 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 LMNTD2Q8IXW0 634 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 C4orf19Q8IY42 314 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 DPF2Q92785 391 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 MED15Q96RN5 788 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 AGPAT5Q9NUQ2 364 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 M0QYV0 167 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ATP1A1P05023 1023 aaKnown RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 PRLRP16471 622 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 ACADSBP45954 432 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 FXR1P51114 621 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 PLAAQ9Y263 795 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 NRAPQ86VF7 1730 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
PTCH1-208ENST00000430669 PPP1R12AO14974 1030 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-208ENST00000430669 PHF2O75151 1096 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms