RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CDCA2Q69YH5 1023 aaPredicted RBP13.26□□□□□ -0.29
TTC3-208ENST00000428693 OTOP3Q7RTS5 596 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 ASIC4Q96FT7 647 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 PAAF1Q9BRP4 392 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 KCNH6Q9H252 994 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 FZD8Q9H461 694 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 DNM3Q9UQ16 869 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 PCDHB6Q9Y5E3 794 aa13.26□□□□□ -0.29
TTC3-208ENST00000428693 SF3B1O75533 1304 aaKnown RBP eCLIP13.25□□□□□ -0.29
TTC3-208ENST00000428693 PP2D1A8MPX8 630 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 E9PMD0 336 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 K7ERI5 159 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 ACKR2O00590 384 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 INPPL1O15357 1258 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 LILRB3O75022 631 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 RFPL2O75678 378 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 RECQL4O94761 1208 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 THP07101 528 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 CDC25AP30304 524 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 MRE11P49959 708 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.298e-8■■■■□ 21.2
TTC3-208ENST00000428693 VCPP55072 806 aaKnown RBP13.25□□□□□ -0.29
TTC3-208ENST00000428693 DSG1Q02413 1049 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 TUSC3Q13454 348 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 DTHD1Q6ZMT9 781 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 UBALD2Q8IYN6 164 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 GSTCDQ8NEC7 633 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 PRSS33Q8NF86 280 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 SMG7Q92540 1137 aaKnown RBP13.25□□□□□ -0.29
TTC3-208ENST00000428693 KIFAP3Q92845 792 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 KIF2CQ99661 725 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 UPF2Q9HAU5 1272 aaKnown RBP13.25□□□□□ -0.29
TTC3-208ENST00000428693 USTQ9Y2C2 406 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 STK24Q9Y6E0 443 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 PIEZO1Q92508 2521 aa13.25□□□□□ -0.29
TTC3-208ENST00000428693 TGM5O43548 720 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 HARSP12081 509 aaKnown RBP13.24□□□□□ -0.29
TTC3-208ENST00000428693 AVPR2P30518 371 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 EFNA5P52803 228 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 PTPN5P54829 565 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 PEX3P56589 373 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 OSTNP61366 133 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 RAD51AP2Q09MP3 1159 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 PDIA5Q14554 519 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 RABEP1Q15276 862 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 DCAF4L1Q3SXM0 396 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 GLRA4Q5JXX5 417 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 FAM171A1Q5VUB5 890 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
TTC3-208ENST00000428693 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
TTC3-208ENST00000428693 ZDHHC14Q8IZN3 488 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 FLCNQ8NFG4 579 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 PLIN2Q99541 437 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
TTC3-208ENST00000428693 FBXL21Q9UKT6 434 aa13.24□□□□□ -0.29
TTC3-208ENST00000428693 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 STK25O00506 426 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 HIP1RO75146 1068 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 KIF4AO95239 1232 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 EDN1P05305 212 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 MUTP22033 750 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 RFX1P22670 979 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.294e-6■□□□□ 8.3
TTC3-208ENST00000428693 TOB1P50616 345 aaPredicted RBP13.23□□□□□ -0.29
TTC3-208ENST00000428693 CREMQ03060 361 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
TTC3-208ENST00000428693 C15orf39Q6ZRI6 1047 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 C4orf32Q8N8J7 132 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 STAMQ92783 540 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 CDK5RAP3Q96JB5 506 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 PRRX2Q99811 253 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 TCHPQ9BT92 498 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 TTPALQ9BTX7 342 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 CCDC113Q9H0I3 377 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 CXCL16Q9H2A7 254 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 RXFP1Q9HBX9 757 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 CHST7Q9NS84 486 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 FAM86C1Q9NVL1 165 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 POLIQ9UNA4 740 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 C2orf16Q68DN1 1984 aa13.23□□□□□ -0.29
TTC3-208ENST00000428693 PTGESO14684 152 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 GJB2P29033 226 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 YARSP54577 528 aaKnown RBP13.22□□□□□ -0.29
TTC3-208ENST00000428693 PSMD5Q16401 504 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 RTP2Q5QGT7 225 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 NT5DC1Q5TFE4 455 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 LIN9Q5TKA1 542 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 GET4Q7L5D6 327 aaPredicted RBP13.22□□□□□ -0.29
TTC3-208ENST00000428693 RNF168Q8IYW5 571 aaPredicted RBP13.22□□□□□ -0.29
TTC3-208ENST00000428693 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
TTC3-208ENST00000428693 ATOH1Q92858 354 aaPredicted RBP13.22□□□□□ -0.29
TTC3-208ENST00000428693 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms