RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 STK24Q9Y6E0 443 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 RDXP35241 583 aaKnown RBP15.41■□□□□ 0.06
ERCC3-202ENST00000426778 SNRNP35Q16560 246 aaKnown RBP15.41■□□□□ 0.06
ERCC3-202ENST00000426778 FAM182AQ5T1J6 154 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 CC2D2BQ6DHV5 1058 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 MRRFQ96E11 262 aaKnown RBP15.41■□□□□ 0.06
ERCC3-202ENST00000426778 ACCSQ96QU6 501 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 SERPINA10Q9UK55 444 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 R3HDM2Q9Y2K5 976 aaKnown RBP15.41■□□□□ 0.06
ERCC3-202ENST00000426778 TMX2Q9Y320 296 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 LTBP4Q8N2S1 1624 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 C10orf71Q711Q0 1435 aa15.41■□□□□ 0.06
ERCC3-202ENST00000426778 CCT8L1PA6NM43 557 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 PDE6BP35913 854 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 MAP2K2P36507 400 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 SSR1P43307 286 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 XKR9Q5GH70 373 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 SWT1Q5T5J6 900 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 C11orf63Q6NUN7 778 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 CNOT10Q9H9A5 744 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 AAASQ9NRG9 546 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 AGAP1Q9UPQ3 857 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 TCP11X1B4DZS4 312 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 TP73O15350 636 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 CFHP08603 1231 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 NF2P35240 595 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 KIF2BQ8N4N8 673 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 CD101Q93033 1021 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 RAVER2Q9HCJ3 691 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 PCYOX1Q9UHG3 505 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 DIS3Q9Y2L1 958 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 ZNFX1Q9P2E3 1918 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 MIF4GDA9UHW6 222 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 DHX15O43143 795 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 ECEL1O95672 775 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 RPSAP08865 295 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 MRPS9P82933 396 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 CALCOCO2Q13137 446 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 SNCBQ16143 134 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 NFIL3Q16649 462 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 FAM71AQ8IYT1 594 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 PGM2Q96G03 612 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 RANBP17Q9H2T7 1088 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 USTQ9Y2C2 406 aa15.4■□□□□ 0.06
ERCC3-202ENST00000426778 RBBP6Q7Z6E9 1792 aaKnown RBP15.4■□□□□ 0.06
ERCC3-202ENST00000426778 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 PLS3P13797 630 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 SPOPLQ6IQ16 392 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 CCDC91Q7Z6B0 441 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 CYP4X1Q8N118 509 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 ARHGEF2Q92974 986 aaKnown RBP15.39■□□□□ 0.05
ERCC3-202ENST00000426778 SAMD15Q9P1V8 674 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 TRIM33Q9UPN9 1127 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 TMEM120BA0PK00 339 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 TESPA1A2RU30 521 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-202ENST00000426778 CHUKO15111 745 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 P4HBP07237 508 aaKnown RBP15.39■□□□□ 0.05
ERCC3-202ENST00000426778 RWDD2BP57060 319 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 MPP2Q14168 576 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 CNGA2Q16280 664 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 B3GNT9Q6UX72 402 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 SGSM3Q96HU1 749 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 C9orf72Q96LT7 481 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 ACTR5Q9H9F9 607 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-202ENST00000426778 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 THSD7AQ9UPZ6 1657 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
ERCC3-202ENST00000426778 C21orf2O43822 256 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 CETPP11597 493 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 RRM1P23921 792 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 PDE6CP51160 858 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 MTM1Q13496 603 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 C6orf118Q5T5N4 469 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 NUGGCQ68CJ6 796 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 SLC9A9Q8IVB4 645 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 BSNDQ8WZ55 320 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 ART4Q93070 314 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 TAAR1Q96RJ0 339 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 L3MBTL1Q9Y468 752 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 COL11A2P13942 1736 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-202ENST00000426778 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 PODXLO00592 558 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 UBOX5O94941 541 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 CNGA1P29973 690 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 QARSP47897 775 aaKnown RBP15.38■□□□□ 0.05
ERCC3-202ENST00000426778 ITGA8P53708 1063 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 KCNJ2P63252 427 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 ADCY2Q08462 1091 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 MTMR1Q13613 665 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 TKFCQ3LXA3 575 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 SCARA3Q6AZY7 606 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms