RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 NFS1Q9Y697 457 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 SYNGAP1Q96PV0 1343 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 USP2O75604 605 aaPredicted RBP17.4■□□□□ 0.38
CTSB-203ENST00000420692 ATG7O95352 703 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 COMTP21964 271 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 GTF2H1P32780 548 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 HSD17B3P37058 310 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 KCTD16Q68DU8 428 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 LEKR1Q6ZMV7 388 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.382e-23■□□□□ 11.3
CTSB-203ENST00000420692 TMEM143Q96AN5 459 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 NT5C1BQ96P26 610 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 TRIM51Q9BSJ1 452 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 HOXC10Q9NYD6 342 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 PTPRFP10586 1907 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 TMEM110-MUSTN1A8MSY1 372 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 CYP1A2P05177 515 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 IRAK1P51617 712 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 CDR2Q01850 454 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 ASAP3Q8TDY4 903 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 CD2APQ9Y5K6 639 aa17.4■□□□□ 0.38
CTSB-203ENST00000420692 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
CTSB-203ENST00000420692 DKC1O60832 514 aaKnown RBP eCLIP17.39■□□□□ 0.37
CTSB-203ENST00000420692 STAM2O75886 525 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 EDN1P05305 212 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 CLDN10P78369 228 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 MESDQ14696 234 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 EMC2Q15006 297 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 SH3D19Q5HYK7 790 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 LMBRD2Q68DH5 695 aaPredicted RBP17.39■□□□□ 0.37
CTSB-203ENST00000420692 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 CRELD2Q6UXH1 353 aaPredicted RBP17.39■□□□□ 0.37
CTSB-203ENST00000420692 MAATS1Q7Z4T9 603 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 GLG1Q92896 1179 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 ZSWIM1Q9BR11 485 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 PLAAQ9Y263 795 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 PTPRJQ12913 1337 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 GRIN2DO15399 1336 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 ICAM3P32942 547 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 NLRP11P59045 1033 aaKnown RBP17.39■□□□□ 0.37
CTSB-203ENST00000420692 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
CTSB-203ENST00000420692 NLGN2Q8NFZ4 835 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 CCDC26Q8TAB7 109 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 ZBTB45Q96K62 511 aaPredicted RBP17.39■□□□□ 0.37
CTSB-203ENST00000420692 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 RUFY1Q96T51 708 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 R3HDMLQ9H3Y0 253 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 SNCAIPQ9Y6H5 919 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 STYXL1Q9Y6J8 313 aa17.39■□□□□ 0.37
CTSB-203ENST00000420692 GLRA2P23416 452 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 SKOR1P84550 965 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 PRELID2Q8N945 189 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 IFT74Q96LB3 600 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 PCYT2Q99447 389 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 NUP85Q9BW27 656 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 DPH5Q9H2P9 285 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 DHX33Q9H6R0 707 aaKnown RBP17.38■□□□□ 0.37
CTSB-203ENST00000420692 BTBD7Q9P203 1132 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 SIP14410 1827 aa17.38■□□□□ 0.37
CTSB-203ENST00000420692 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 TCRBV7S2A1N4TA0A589 114 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 PYGMP11217 842 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 ENPEPQ07075 957 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 STXBP2Q15833 593 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 DUPD1Q68J44 220 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 SCARA3Q6AZY7 606 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 TTC19Q6DKK2 380 aaPredicted RBP17.37■□□□□ 0.37
CTSB-203ENST00000420692 OR2W6PQ8NHA6 318 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 PSPC1Q8WXF1 523 aaKnown RBP17.37■□□□□ 0.37
CTSB-203ENST00000420692 BICD1Q96G01 975 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 IGKV6D-21A0A0A0MT36 114 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 MIF4GDA9UHW6 222 aaKnown RBP17.37■□□□□ 0.37
CTSB-203ENST00000420692 EXTL3O43909 919 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 C4BPAP04003 597 aaKnown RBP17.37■□□□□ 0.37
CTSB-203ENST00000420692 ARL2P36404 184 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 PTGIRP43119 386 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 ACOT2P49753 483 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 GCNT1Q02742 428 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 SEPT14Q6ZU15 432 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 ZNF564Q8TBZ8 553 aaPredicted RBP17.37■□□□□ 0.37
CTSB-203ENST00000420692 PORCNQ9H237 461 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 LRRC4CQ9HCJ2 640 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 LCMT1Q9UIC8 334 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 GTF3C4Q9UKN8 822 aa17.37■□□□□ 0.37
CTSB-203ENST00000420692 GSTTP1A0A1W2PQM5 241 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 VNN1O95497 513 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 OATP04181 439 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 VGLL4Q14135 290 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 PSMD6Q15008 389 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 CLEC16AQ2KHT3 1053 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 ACAD10Q6JQN1 1059 aa17.36■□□□□ 0.37
CTSB-203ENST00000420692 TTC27Q6P3X3 843 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms