RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 WASP42768 502 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 ALDH1A3P47895 512 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 MAN2A2P49641 1150 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 FLT3LGP49771 235 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 ANAPC15P60006 121 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 EXOSC10Q01780 885 aaKnown RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 CRHR2Q13324 411 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 TOB2Q14106 344 aaPredicted RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 NAIF1Q69YI7 327 aaPredicted RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 PNMA8AQ86V59 439 aaPredicted RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 THEMISQ8N1K5 641 aaPredicted RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 CACTINQ8WUQ7 758 aaKnown RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 SSH1Q8WYL5 1049 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZNF503Q96F45 646 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZNF747Q9BV97 191 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 AJAP1Q9UKB5 411 aaPredicted RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 LEFTY2O00292 366 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 CYP27B1O15528 508 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 HTRA2O43464 458 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 AMHP03971 560 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 PDGFRBP09619 1106 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 IGBP1P78318 339 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 KIF23Q02241 960 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 IL10RAQ13651 578 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 VPS72Q15906 364 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 DCAF17Q5H9S7 520 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 FAM47AQ5JRC9 791 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 AFMIDQ63HM1 303 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 FAM83AQ86UY5 434 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 GSPT2Q8IYD1 628 aaKnown RBP5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 COA7Q96BR5 231 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 UHRF1Q96T88 793 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 MYOCQ99972 504 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 SLC23A1Q9UHI7 598 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZBTB21Q9ULJ3 1066 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 PCDHA13Q9Y5I0 950 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 ACTL7AQ9Y615 435 aa5.99□□□□□ -1.45
HMGB1P49-201ENST00000418882 CCDC154A6NI56 674 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 TBKBP1A7MCY6 615 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 FAM20BO75063 409 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZFP36P26651 326 aaKnown RBP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 APOBEC3AP31941 199 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 FXR1P51114 621 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 NEK2P51955 445 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 PER3P56645 1201 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 ATP8B2P98198 1209 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 TARDBPQ13148 414 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 FOXE3Q13461 319 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 MTM1Q13496 603 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 BMT2Q1RMZ1 405 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 MIIPQ5JXC2 388 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 METRNLQ641Q3 311 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 RAVER1Q8IY67 606 aaKnown RBP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 CMTR2Q8IYT2 770 aaKnown RBP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 DCBLD1Q8N8Z6 715 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 CCHCR1Q8TD31 782 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 NEU1Q99519 415 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 TEX101Q9BY14 249 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZNF703Q9H7S9 590 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 LANCL2Q9NS86 450 aa5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 TYW1Q9NV66 732 aaKnown RBP5.98□□□□□ -1.45
HMGB1P49-201ENST00000418882 FAM171A2A8MVW0 826 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 B5MCH6 92 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 ENDOD1O94919 500 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 NR4A1P22736 598 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 SP140Q13342 867 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 CNGB1Q14028 1251 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 FNDC7Q5VTL7 733 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 EFCAB2Q5VUJ9 269 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 CRIP3Q6Q6R5 217 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 PDZD4Q76G19 769 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 RHOT1Q8IXI2 618 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 OR10H5Q8NGA6 315 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 KAT5Q92993 513 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 CHMP4CQ96CF2 233 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 PLEKHG4BQ96PX9 1271 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 SENP6Q9GZR1 1112 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZNF768Q9H5H4 540 aaKnown RBP5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 SPON1Q9HCB6 807 aa5.97□□□□□ -1.45
HMGB1P49-201ENST00000418882 AHRRA9YTQ3 701 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 PRR5-ARHGAP8B1AHC4 643 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 GPR32O75388 356 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 ALDH1L1O75891 902 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 RAP2AP10114 183 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 HSP90B1P14625 803 aaKnown RBP5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 FAM189BP81408 668 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 MCL1Q07820 350 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 TTF1Q15361 905 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 METTL24Q5JXM2 366 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 HOOK2Q96ED9 719 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 DMRTA2Q96SC8 542 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 C7orf25Q9BPX7 421 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 MRI1Q9BV20 369 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 VPS11Q9H270 941 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 HDAC5Q9UQL6 1122 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 RUVBL1Q9Y265 456 aaKnown RBP5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 THRAP3Q9Y2W1 955 aaKnown RBP5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 PCDHB1Q9Y5F3 818 aa5.96□□□□□ -1.46
HMGB1P49-201ENST00000418882 MRFAP1Q9Y605 127 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms