RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 H3BQV1 296 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 PTGESO14684 152 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 TADA2AO75478 443 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 MYBP10242 640 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 RILPL1Q5EBL4 403 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 KCNK18Q7Z418 384 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 KREMEN2Q8NCW0 462 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 MAN1C1Q9NR34 630 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 GDAQ9Y2T3 454 aa22.71■■□□□ 1.23
LMBR1-203ENST00000414218 CASTOR2A6NHX0 329 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 CCDC169A6NNP5 214 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 K7ERI5 159 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 THP07101 528 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 PEX3P56589 373 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 TUSC3Q13454 348 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 HSP90AA2PQ14568 343 aaPredicted RBP22.7■■□□□ 1.22
LMBR1-203ENST00000414218 ZRSR1Q15695 479 aaKnown RBP22.7■■□□□ 1.22
LMBR1-203ENST00000414218 USP41Q3LFD5 358 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 ATF7IP2Q5U623 682 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 TDRD5Q8NAT2 981 aaKnown RBP22.7■■□□□ 1.22
LMBR1-203ENST00000414218 RUSC1Q9BVN2 902 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 C2orf16Q68DN1 1984 aa22.7■■□□□ 1.22
LMBR1-203ENST00000414218 HIP1RO75146 1068 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 GLUD1P00367 558 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 SPATA31D3P0C874 917 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 NPTX2P47972 431 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 MCM2P49736 904 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 ATP2C1P98194 919 aaPredicted RBP22.69■■□□□ 1.22
LMBR1-203ENST00000414218 DCAF4L1Q3SXM0 396 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 RINT1Q6NUQ1 792 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 SPATA31D4Q6ZUB0 917 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 PALB2Q86YC2 1186 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 ZDHHC14Q8IZN3 488 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 DAW1Q8N136 415 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 HASPINQ8TF76 798 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 RIN2Q8WYP3 895 aaPredicted RBP22.69■■□□□ 1.22
LMBR1-203ENST00000414218 ASIC4Q96FT7 647 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 LIMD1Q9UGP4 676 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 SMC3Q9UQE7 1217 aa22.69■■□□□ 1.22
LMBR1-203ENST00000414218 DENND4AQ7Z401 1863 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 MUC6Q6W4X9 2439 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 ZNF318Q5VUA4 2279 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 C1orf186Q6ZWK4 172 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 GLYCTKQ8IVS8 523 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 TBC1D32Q96NH3 1257 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 USTQ9Y2C2 406 aa22.68■■□□□ 1.22
LMBR1-203ENST00000414218 SF3B1O75533 1304 aaKnown RBP eCLIP22.67■■□□□ 1.225e-8■■■■■ 189.5
LMBR1-203ENST00000414218 CCDC195A0A1B0GUA6 201 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 KIF4AO95239 1232 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 ASGR2P07307 311 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 RPL17P18621 184 aaKnown RBP22.67■■□□□ 1.22
LMBR1-203ENST00000414218 MAPK7Q13164 816 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 NAB2Q15742 525 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 C15orf39Q6ZRI6 1047 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 SUGP1Q8IWZ8 645 aaKnown RBP22.67■■□□□ 1.22
LMBR1-203ENST00000414218 PLCD3Q8N3E9 789 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 FBXL6Q8N531 539 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 DRC1Q96MC2 740 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 PLIN2Q99541 437 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 KCNH6Q9H252 994 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.67■■□□□ 1.22
LMBR1-203ENST00000414218 FNIP2Q9P278 1114 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 SORCS3Q9UPU3 1222 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 TNFSF13BQ9Y275 285 aa22.67■■□□□ 1.22
LMBR1-203ENST00000414218 VWA3AA6NCI4 1184 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 SFI1A8K8P3 1242 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 BRD1O95696 1058 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 DMP1Q13316 513 aaPredicted RBP22.66■■□□□ 1.22
LMBR1-203ENST00000414218 ELMSAN1Q6PJG2 1045 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 PRSS55Q6UWB4 352 aaPredicted RBP22.66■■□□□ 1.22
LMBR1-203ENST00000414218 CCDC149Q6ZUS6 474 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 APBB1IPQ7Z5R6 666 aaPredicted RBP22.66■■□□□ 1.22
LMBR1-203ENST00000414218 GPR65Q8IYL9 337 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 CMASQ8NFW8 434 aaPredicted RBP22.66■■□□□ 1.22
LMBR1-203ENST00000414218 PNMA5Q96PV4 448 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 ACO2Q99798 780 aaKnown RBP22.66■■□□□ 1.22
LMBR1-203ENST00000414218 SMOC2Q9H3U7 446 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 TMEM134Q9H6X4 195 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 KMT5AQ9NQR1 393 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 DPP7Q9UHL4 492 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 TRIP11Q15643 1979 aa22.66■■□□□ 1.22
LMBR1-203ENST00000414218 MTCL1Q9Y4B5 1905 aaKnown RBP22.66■■□□□ 1.22
LMBR1-203ENST00000414218 PHLPP2Q6ZVD8 1323 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 TGM5O43548 720 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 RFPL2O75678 378 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 RAD51AP2Q09MP3 1159 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 MTMR3Q13615 1198 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 RTP2Q5QGT7 225 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 HYIQ5T013 277 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 FAM171A1Q5VUB5 890 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 LARP1BQ659C4 914 aaKnown RBP22.65■■□□□ 1.22
LMBR1-203ENST00000414218 OTOP3Q7RTS5 596 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 TAS1R3Q7RTX0 852 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 CEP57Q86XR8 500 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 UBALD2Q8IYN6 164 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 ACSF2Q96CM8 615 aaPredicted RBP22.65■■□□□ 1.22
LMBR1-203ENST00000414218 ARHGAP28Q9P2N2 729 aa22.65■■□□□ 1.22
LMBR1-203ENST00000414218 RBM19Q9Y4C8 960 aaKnown RBP22.65■■□□□ 1.22
LMBR1-203ENST00000414218 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.65■■□□□ 1.22
LMBR1-203ENST00000414218 SLC16A4O15374 487 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms