RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 PLBD2Q8NHP8 589 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 FBXO41Q8TF61 875 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 LCORQ96JN0 433 aaPredicted RBP6.43□□□□□ -1.38
LSM5-206ENST00000409987 CLPTM1LQ96KA5 538 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 UHRF1Q96T88 793 aaPredicted RBP6.43□□□□□ -1.38
LSM5-206ENST00000409987 SLC38A3Q99624 504 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 L1RE1Q9UN81 338 aa6.43□□□□□ -1.38
LSM5-206ENST00000409987 ARHGAP6O43182 974 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
LSM5-206ENST00000409987 NBPF7P0C2Y1 421 aaPredicted RBP6.42□□□□□ -1.38
LSM5-206ENST00000409987 GUCY1A2P33402 732 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 DUSP2Q05923 314 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 NOGQ13253 232 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 NFYCQ13952 458 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 SAFB2Q14151 953 aaKnown RBP eCLIP6.42□□□□□ -1.38
LSM5-206ENST00000409987 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 KHDC1Q4VXA5 237 aaKnown RBP6.42□□□□□ -1.38
LSM5-206ENST00000409987 ANKRD53Q8N9V6 530 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 CDK5RAP3Q96JB5 506 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 TMX3Q96JJ7 454 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 SLC6A15Q9H2J7 730 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 BHMT2Q9H2M3 363 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 LANCL2Q9NS86 450 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
LSM5-206ENST00000409987 MYBBP1AQ9BQG0 1328 aaKnown RBP6.42□□□□□ -1.38
LSM5-206ENST00000409987 MROH6A6NGR9 719 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 PMM2O15305 246 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 SH3BP5O60239 455 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 GASTP01350 101 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 JUNP05412 331 aaKnown RBP6.41□□□□□ -1.38
LSM5-206ENST00000409987 GYPEP15421 78 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 FPR1P21462 350 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 PAX3P23760 479 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 SLURP1P55000 103 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 FAM193AP78312 1265 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 ATP8B2P98198 1209 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 TLE1Q04724 770 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 BRD3Q15059 726 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 VPS72Q15906 364 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 KIAA0753Q2KHM9 967 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 GAGE13Q4V321 117 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 DAAM2Q86T65 1068 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 KBTBD2Q8IY47 623 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 POU5F2Q8N7G0 328 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 C3orf20Q8ND61 904 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 CFHR4Q92496 578 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 CYFIP2Q96F07 1278 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 RPL10LQ96L21 214 aaKnown RBP6.41□□□□□ -1.38
LSM5-206ENST00000409987 GPHA2Q96T91 129 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 MPHOSPH6Q99547 160 aaKnown RBP6.41□□□□□ -1.38
LSM5-206ENST00000409987 VRK1Q99986 396 aaPredicted RBP6.41□□□□□ -1.38
LSM5-206ENST00000409987 SENP6Q9GZR1 1112 aaPredicted RBP6.41□□□□□ -1.38
LSM5-206ENST00000409987 JADE2Q9NQC1 790 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
LSM5-206ENST00000409987 PCDHA3Q9Y5H8 950 aa6.41□□□□□ -1.38
LSM5-206ENST00000409987 A0A088AWK7 358 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 CAPN8A6NHC0 703 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 LDHAP00338 332 aaKnown RBP6.4□□□□□ -1.38
LSM5-206ENST00000409987 SLC5A1P13866 664 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 PCSK1P29120 753 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 CASRP41180 1078 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 RAP1GAPP47736 663 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 ZNF280AP59817 542 aaPredicted RBP6.4□□□□□ -1.38
LSM5-206ENST00000409987 RAB1AP62820 205 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 NKX6-1P78426 367 aaPredicted RBP6.4□□□□□ -1.38
LSM5-206ENST00000409987 MTM1Q13496 603 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 SEMA5AQ13591 1074 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 RAB39AQ14964 217 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 CNN3Q15417 329 aaKnown RBP6.4□□□□□ -1.38
LSM5-206ENST00000409987 LONRF3Q496Y0 759 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 CCDC157Q569K6 752 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 HSP90AB4PQ58FF6 505 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
LSM5-206ENST00000409987 KRT40Q6A162 431 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 HEATR3Q7Z4Q2 680 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 TMEM151BQ8IW70 566 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 MDM1Q8TC05 714 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 STON2Q8WXE9 905 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 IL17RAQ96F46 866 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 NT5C1BQ96P26 610 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 ENKD1Q9H0I2 346 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 CALCOCO1Q9P1Z2 691 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 POLHQ9Y253 713 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 NR2E1Q9Y466 385 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 PCDHGB6Q9Y5F9 930 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 SLC4A7Q9Y6M7 1214 aa6.4□□□□□ -1.38
LSM5-206ENST00000409987 MATN2O00339 956 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 NUAK1O60285 661 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 GPR32O75388 356 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 DDCP20711 480 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 PTPN7P35236 360 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 SNAPC2Q13487 334 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 PICALMQ13492 652 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
LSM5-206ENST00000409987 DARS2Q6PI48 645 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms