RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 KLF1Q13351 362 aaPredicted RBP9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 ZNF211Q13398 564 aaPredicted RBP9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 ATP13A4Q4VNC1 1196 aa9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 USP38Q8NB14 1042 aa9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 TARS2Q9BW92 718 aaKnown RBP9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 GLT8D2Q9H1C3 349 aa9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 JRKLQ9Y4A0 524 aa9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
GAPVD1-204ENST00000394083 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 PYGMP11217 842 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 MAP1SQ66K74 1059 aaPredicted RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 PRELID2Q8N945 189 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 AP1M1Q9BXS5 423 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 CACNG4Q9UBN1 327 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 TANC1Q9C0D5 1861 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 IGF2BP3O00425 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 KRT14P02533 472 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 HOXA11P31270 313 aaPredicted RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 GAD2Q05329 585 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 PLCB4Q15147 1175 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 SFMBT2Q5VUG0 894 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 PHLDB2Q86SQ0 1253 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 GLG1Q92896 1179 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 CDK5RAP3Q96JB5 506 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 SLC9A2Q9UBY0 812 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 C22orf31O95567 290 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 ASPAP45381 313 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 RPL7AP62424 266 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 CCDC42Q96M95 316 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 RNF181Q9P0P0 153 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 BTBD19C9JJ37 291 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 TULP2O00295 520 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 PES1O00541 588 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 KIF4AO95239 1232 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 CYP11B1P15538 503 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 MAGEA1P43355 309 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 BYSLQ13895 437 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 ARHGEF16Q5VV41 709 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 UBE2Q2Q8WVN8 375 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 SECISBP2LQ93073 1101 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 MAP3K20Q9NYL2 800 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 ATP8B3O60423 1300 aa9.16□□□□□ -0.94
GAPVD1-204ENST00000394083 NOTCH4Q99466 2003 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 WDR64B1ANS9 1081 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 CYP1A1P04798 512 aaPredicted RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 HOXD8P13378 290 aaPredicted RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 TCF7P36402 384 aaPredicted RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 TAS2R40P59535 323 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 ITIH3Q06033 890 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 MON1BQ7L1V2 547 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 TRPV1Q8NER1 839 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 SPIRE2Q8WWL2 714 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 RAB34Q9BZG1 259 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 ADARB2Q9NS39 739 aaKnown RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 PLXNA3P51805 1871 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 CETN3O15182 167 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 CETPP11597 493 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 PSMC2P35998 433 aaKnown RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 HADHBP55084 474 aaKnown RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 MBTD1Q05BQ5 628 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 EMC2Q15006 297 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 OR2W6PQ8NHA6 318 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 SELENOOQ9BVL4 669 aa9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 CNOT8Q9UFF9 292 aaKnown RBP9.15□□□□□ -0.94
GAPVD1-204ENST00000394083 UBE4BO95155 1302 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 GUCY2FP51841 1108 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 TPM4P67936 248 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 SEPT14Q6ZU15 432 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 NEK11Q8NG66 645 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 DDX47Q9H0S4 455 aaKnown RBP9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 ACAD9Q9H845 621 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 ANKEF1Q9NU02 776 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 FAM184BQ9ULE4 1060 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 AGTPBP1Q9UPW5 1226 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.95
GAPVD1-204ENST00000394083 MYADML2A6NDP7 307 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 SHBGP04278 402 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 CYP2C19P33261 490 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 GGCXP38435 758 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 ORC1Q13415 861 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 ARHGAP44Q17R89 818 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 FILIP1LQ4L180 1135 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 SH3PXD2AQ5TCZ1 1133 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 MICALCLQ6ZW33 695 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 PRPF31Q8WWY3 499 aaKnown RBP9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 POLR3FQ9H1D9 316 aaPredicted RBP9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 UBE2TQ9NPD8 197 aaPredicted RBP9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 CGNQ9P2M7 1197 aaKnown RBP9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 SEL1LQ9UBV2 794 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 FAM155AB1AL88 458 aaPredicted RBP9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 FDX1P10109 184 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 TFE3P19532 575 aaPredicted RBP9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 NF2P35240 595 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 STIM1Q13586 685 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 CCL14Q16627 93 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 FAM102BQ5T8I3 360 aa9.14□□□□□ -0.95
GAPVD1-204ENST00000394083 USP6NLQ92738 828 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms