RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 FAM129AQ9BZQ8 928 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ISCUQ9H1K1 167 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ATP6V0A4Q9HBG4 840 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 MRPL40Q9NQ50 206 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 RBM12Q9NTZ6 932 aaKnown RBP8.92□□□□□ -0.98
VPS36-201ENST00000378060 PIM2Q9P1W9 311 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 FHOD1Q9Y613 1164 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 ARAP2Q8WZ64 1704 aa8.92□□□□□ -0.98
VPS36-201ENST00000378060 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 F5H6K3 240 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 H0Y3Z8 333 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 TRIM66O15016 1216 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 CCDC22O60826 627 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 KLRC3Q07444 240 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 THOC5Q13769 683 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 ARMCX2Q7L311 632 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 TTC39CQ8N584 583 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 CFAP36Q96G28 342 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 XPO6Q96QU8 1125 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 EIF2AK1Q9BQI3 630 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 TRIM56Q9BRZ2 755 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 AGXT2Q9BYV1 514 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 NGRNQ9NPE2 291 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 PITPNM2Q9BZ72 1349 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 KPNA7A9QM74 516 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 CLDN3O15551 220 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 SORBS3O60504 671 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 PHF2O75151 1096 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 MX2P20592 715 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 IZUMO3Q5VZ72 239 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 SPOPLQ6IQ16 392 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 VPS39Q96JC1 886 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 FAM167AQ96KS9 214 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 FEM1BQ9UK73 627 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 USP15Q9Y4E8 981 aaPredicted RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 EMSYQ7Z589 1322 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 AKAP11Q9UKA4 1901 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 ESYT2A0FGR8 921 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 MYMKA6NI61 221 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 KIAA0391O15091 583 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 CDK17Q00537 523 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 SATB1Q01826 763 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 TAF1BQ53T94 588 aaPredicted RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 TMEM270Q6UE05 265 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 TRAPPC11Q7Z392 1133 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 FBXL16Q8N461 479 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 USP38Q8NB14 1042 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 RIN2Q8WYP3 895 aaPredicted RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 HEXIM2Q96MH2 286 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 ZIM3Q96PE6 472 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 ZWILCHQ9H900 591 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 KCND2Q9NZV8 630 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 TRIM10Q9UDY6 481 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 NUB1Q9Y5A7 615 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 ZHX2Q9Y6X8 837 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 AK9Q5TCS8 1911 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 SYNJ2BP-COX16A0A087WUM0 186 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 ARHGEF37A1IGU5 675 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 DENND3A2RUS2 1198 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 HSPA4LO95757 839 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 FDX1P10109 184 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 YBX3P16989 372 aaKnown RBP eCLIP8.91□□□□□ -0.98
VPS36-201ENST00000378060 CRKP46108 304 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 AP3M2P53677 418 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 AP2B1P63010 937 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 CCNA1P78396 465 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 GPS1Q13098 491 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 DALRD3Q5D0E6 543 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 CAPRIN2Q6IMN6 1127 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 AGGF1Q8N302 714 aaeCLIP8.91□□□□□ -0.98
VPS36-201ENST00000378060 C7orf31Q8N865 590 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 ARMC2Q8NEN0 867 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 ALKBH8Q96BT7 664 aaKnown RBP8.91□□□□□ -0.98
VPS36-201ENST00000378060 NRBF2Q96F24 287 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 RPS6KC1Q96S38 1066 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 DNAJC7Q99615 494 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 COX16Q9P0S2 106 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 APEX2Q9UBZ4 518 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 AKT3Q9Y243 479 aa8.91□□□□□ -0.98
VPS36-201ENST00000378060 SLC16A4O15374 487 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 OATP04181 439 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 TMEM253P0C7T8 217 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 TRIM49P0CI25 452 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 TRIM49CP0CI26 452 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 CARSP49589 748 aaKnown RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 PSMC5P62195 406 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 IGBP1P78318 339 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 DYNC1I2Q13409 638 aaKnown RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 SUPT20HL1Q3ZLR7 823 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
VPS36-201ENST00000378060 ZNF746Q6NUN9 644 aaPredicted RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 SP8Q8IXZ3 490 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 DHX38Q92620 1227 aaKnown RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 STAMBPL1Q96FJ0 436 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 MS4A14Q96JA4 679 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 RMDN3Q96TC7 470 aa8.9□□□□□ -0.98
VPS36-201ENST00000378060 SUCLA2Q9P2R7 463 aaPredicted RBP8.9□□□□□ -0.98
VPS36-201ENST00000378060 CNTNAP5Q8WYK1 1306 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms