RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 FRMPD2Q68DX3 1309 aaPredicted RBP12.49□□□□□ -0.41
SMARCA1-201ENST00000371121 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 NR3C1P04150 777 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 DLATP10515 647 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 ADSSP30520 456 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 SESN3P58005 492 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 RCN2Q14257 317 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 KPNB1Q14974 876 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 BMT2Q1RMZ1 405 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 FBXO27Q8NI29 283 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 FIZ1Q96SL8 496 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 LRCH1Q9Y2L9 728 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 PDLIM1O00151 329 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 FOXN3O00409 490 aaPredicted RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 SPAG7O75391 227 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 UBE4AQ14139 1066 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 KIF22Q14807 665 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 CLNKQ7Z7G1 428 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 FBF1Q8TES7 1133 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 LRRC37BQ96QE4 947 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 TRIM7Q9C029 511 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 R3HDM2Q9Y2K5 976 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 SMCHD1A6NHR9 2005 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 GSTT1P30711 240 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 RPA3P35244 121 aaPredicted RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 PSMC4P43686 418 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 RCN1Q15293 331 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 C1orf54Q8WWF1 131 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 DNAJC12Q9UKB3 198 aa12.48□□□□□ -0.41
SMARCA1-201ENST00000371121 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 STX2P32856 288 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 RANBP1P43487 201 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 MAPK6Q16659 721 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 CLEC10AQ8IUN9 316 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 RFWD2Q8NHY2 731 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 KCNK13Q9HB14 408 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 MEIS1O00470 390 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 RRM1P23921 792 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 EPS15P42566 896 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 ITGA8P53708 1063 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 KRT17Q04695 432 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 RINLQ6ZS11 566 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 TRABD2AQ86V40 505 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 APLFQ8IW19 511 aaPredicted RBP12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 FGD4Q96M96 766 aa12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 C12orf65Q9H3J6 166 aaKnown RBP12.47□□□□□ -0.41
SMARCA1-201ENST00000371121 PDXKO00764 312 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 TYROBPO43914 113 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 COQ9O75208 318 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 GYS1P13807 737 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 AMPD1P23109 780 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 VHLP40337 213 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 HSF5Q4G112 596 aaPredicted RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 MTDHQ86UE4 582 aaKnown RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 LMNTD2Q8IXW0 634 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 TGFBRAP1Q8WUH2 860 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 CRYGNQ8WXF5 182 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 WHRNQ9P202 907 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 EXOC3O60645 756 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 ETS2P15036 469 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 ADRA2BP18089 450 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 LMNB1P20700 586 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 STAT1P42224 750 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 MCL1Q07820 350 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 TRIP13Q15645 432 aaPredicted RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 RNF111Q6ZNA4 994 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 CCDC65Q8IXS2 484 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 MAIP1Q8WWC4 291 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 CTNNBL1Q8WYA6 563 aaPredicted RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 NDNQ99608 321 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 PLCD4Q9BRC7 762 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 STMN4Q9H169 189 aaPredicted RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 SAP30BPQ9UHR5 308 aaKnown RBP12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 USH1CQ9Y6N9 552 aa12.46□□□□□ -0.41
SMARCA1-201ENST00000371121 GSC2O15499 205 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms