RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 FILIP1LQ4L180 1135 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 TMEM192Q8IY95 271 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 SCLYQ96I15 445 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 IFIH1Q9BYX4 1025 aaKnown RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 RBAKQ9NYW8 714 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 MAPK13O15264 365 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 TRIM49P0CI25 452 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 TRIM49CP0CI26 452 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 CYP24A1Q07973 514 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 PTPN21Q16825 1174 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 MIIPQ5JXC2 388 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 ANP32BQ92688 251 aaKnown RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 SLC35C1Q96A29 364 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 MFSD14AQ96MC6 490 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 NDST4Q9H3R1 872 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
BRCC3-204ENST00000369462 HES2Q9Y543 173 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 A0A1B0GTH6 734 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 TEX33O43247 280 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 NBNO60934 754 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 STAG3L1P0CL83 205 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 VAMP7P51809 220 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 ZNF75DP51815 510 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 DLG4P78352 724 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 KCNH2Q12809 1159 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 GPNMBQ14956 572 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 DCAF4L1Q3SXM0 396 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 VWA3BQ502W6 1294 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 PLEKHO2Q8TD55 490 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 PARD3BQ8TEW8 1205 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 FAM212AQ96EL1 285 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 CHST12Q9NRB3 414 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 INTS13Q9NVM9 706 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 TPM3P06753 285 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 DLATP10515 647 aaKnown RBP11.9□□□□□ -0.5
BRCC3-204ENST00000369462 HSP90AA2PQ14568 343 aaPredicted RBP11.9□□□□□ -0.5
BRCC3-204ENST00000369462 NR1I3Q14994 352 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 UBXN11Q5T124 520 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 CCDC51Q96ER9 411 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
BRCC3-204ENST00000369462 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 NXF3Q9H4D5 531 aaKnown RBP11.9□□□□□ -0.5
BRCC3-204ENST00000369462 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
BRCC3-204ENST00000369462 LGALS16A8MUM7 142 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 MGEA5O60502 916 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 CLTAP09496 248 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 CXCL8P10145 99 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 WNT7BP56706 349 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 UBXN1Q04323 297 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 ENOX2Q16206 610 aaKnown RBP11.89□□□□□ -0.51
BRCC3-204ENST00000369462 ABHD8Q96I13 439 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 FNBP1Q96RU3 617 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 ADAM2Q99965 735 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 RPF1Q9H9Y2 349 aaKnown RBP11.89□□□□□ -0.51
BRCC3-204ENST00000369462 SNTG2Q9NY99 539 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 IBSPP21815 317 aaPredicted RBP11.89□□□□□ -0.51
BRCC3-204ENST00000369462 USP37Q86T82 979 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 DBF4BQ8NFT6 615 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 ACAP3Q96P50 834 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 APOL6Q9BWW8 343 aa11.89□□□□□ -0.51
BRCC3-204ENST00000369462 TRIM43BA6NCK2 446 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 GRM5P41594 1212 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 PSMD6Q15008 389 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 KYAT1Q16773 422 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 TRIM43Q96BQ3 446 aaPredicted RBP11.88□□□□□ -0.51
BRCC3-204ENST00000369462 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 CCDC94Q9BW85 323 aaPredicted RBP11.88□□□□□ -0.51
BRCC3-204ENST00000369462 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 IPPQ9Y573 584 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 PCDHB2Q9Y5E7 798 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
BRCC3-204ENST00000369462 AFPP02771 609 aaKnown RBP11.88□□□□□ -0.51
BRCC3-204ENST00000369462 TNNI1P19237 187 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 AKAP5P24588 427 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 ITGB8P26012 769 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 GCLMP48507 274 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 PPP3CAQ08209 521 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 DSC3Q14574 896 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 SLC10A6Q3KNW5 377 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
BRCC3-204ENST00000369462 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 FAM84AQ96KN4 292 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
BRCC3-204ENST00000369462 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
BRCC3-204ENST00000369462 RAG1P15918 1043 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 PLEKHG4Q58EX7 1191 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
BRCC3-204ENST00000369462 SMG8Q8ND04 991 aaKnown RBP11.87□□□□□ -0.51
BRCC3-204ENST00000369462 TET1Q8NFU7 2136 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms