RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 IFIT1P09914 478 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 CYP2C8P10632 490 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 FLT4P35916 1363 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 GRK6P43250 576 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 USP11P51784 963 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 UBASH3AP57075 661 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 PTPN11Q06124 597 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 AOX1Q06278 1338 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 SSRP1Q08945 709 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 COX10Q12887 443 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 ITPR3Q14573 2671 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 PUM1Q14671 1186 aaKnown RBP eCLIP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 LRFN4Q6PJG9 635 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 BNC2Q6ZN30 1099 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 MCM10Q7L590 875 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 RASGRP2Q7LDG7 609 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 SRLQ86TD4 932 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 ST13P5Q8NFI4 369 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 POF1BQ8WVV4 589 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 CCT6BQ92526 530 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 HDAC2Q92769 488 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 PLPPR2Q96GM1 343 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 BORCS6Q96GS4 357 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 EAF1Q96JC9 268 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 FANCD2OSQ96PS1 177 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 TRIM8Q9BZR9 551 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 DEF6Q9H4E7 631 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 GSX1Q9H4S2 264 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 NCOA5Q9HCD5 579 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 TCF7L1Q9HCS4 588 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 TRMT13Q9NUP7 481 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 PCMTD2Q9NV79 361 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 GJD2Q9UKL4 321 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 GTF3C4Q9UKN8 822 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 MAST2Q6P0Q8 1798 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 DHX15O43143 795 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GPR39O43194 453 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MSL3P1P0C860 447 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 DESP17661 470 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GPTP24298 496 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 KRT20P35900 424 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ASPAP45381 313 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 RABGGTBP53611 331 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MOGSQ13724 837 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CWF19L2Q2TBE0 894 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 TRIM60Q495X7 471 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 RETSATQ6NUM9 610 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 USP51Q70EK9 711 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 TBC1D1Q86TI0 1168 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM26EQ8N5C1 309 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MSANTD4Q8NCY6 345 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 OR6P1Q8NGX9 317 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 TP53INP1Q96A56 240 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CEP95Q96GE4 821 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MYRFLQ96LU7 910 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 AGAP3Q96P47 875 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 UBL7Q96S82 380 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 LMAN2LQ9H0V9 348 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 DEFB129Q9H1M3 183 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ZCCHC17Q9NP64 241 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 PDLIM7Q9NR12 457 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 SRPK3Q9UPE1 567 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 IGF2RP11717 2491 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CEMIPQ8WUJ3 1361 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FRMPD2Q68DX3 1309 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM221AA4D161 298 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 INO80B-WBP1J3KQ70 363 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MPHOSPH10O00566 681 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 PMM2O15305 246 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 BRINP1O60477 761 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GREM1O60565 184 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 MAFKO60675 156 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FBXO21O94952 628 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 STARD3NLO95772 234 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 DDX58O95786 925 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ADRB1P08588 477 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 DRD2P14416 443 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 RAB6AP20340 208 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 HPDP32754 393 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GALNSP34059 522 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CLNS1AP54105 237 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GABREP78334 506 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 ADCY1Q08828 1119 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 GTF2H3Q13889 308 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 VGLL4Q14135 290 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 HECTD3Q5T447 861 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 XRRA1Q6P2D8 792 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FBXL19Q6PCT2 694 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CYP26C1Q6V0L0 522 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 PRR23BQ6ZRT6 265 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CYFIP1Q7L576 1253 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 SPATS2Q86XZ4 545 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM20CQ8IXL6 584 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 SP8Q8IXZ3 490 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CEP57L1Q8IYX8 460 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 CCDC191Q8NCU4 936 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 RNF214Q8ND24 703 aa3.94□□□□□ -1.78
ECHDC1-205ENST00000368295 SPATA18Q8TC71 538 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms