RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 HSD17B3P37058 310 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ITIH3Q06033 890 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 NEDD9Q14511 834 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 MUM1L1Q5H9M0 696 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 APOBEC3FQ8IUX4 373 aaKnown RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 LRRC71Q8N4P6 559 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 PDCD2LQ9BRP1 358 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 TMEM8AQ9HCN3 771 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ACP6Q9NPH0 428 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 SEPT10Q9P0V9 454 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 UBE4BO95155 1302 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 GMNCA6NCL1 334 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 PIK3R2O00459 728 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 VIL1P09327 827 aaKnown RBP9.02□□□□□ -0.96
PTPRK-206ENST00000368215 ACTR2P61160 394 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 MTM1Q13496 603 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 C1orf186Q6ZWK4 172 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 SRLQ86TD4 932 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.02□□□□□ -0.96
PTPRK-206ENST00000368215 SLC5A5Q92911 643 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 KAT5Q92993 513 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 SMC6Q96SB8 1091 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 ELP3Q9H9T3 547 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 AGO4Q9HCK5 861 aaKnown RBP9.02□□□□□ -0.96
PTPRK-206ENST00000368215 FBXO40Q9UH90 709 aa9.02□□□□□ -0.96
PTPRK-206ENST00000368215 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.02□□□□□ -0.96
PTPRK-206ENST00000368215 M0R2N6 131 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 MAP2K7O14733 419 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 EIF3HO15372 352 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■□□□□ 10.9
PTPRK-206ENST00000368215 OSBPP22059 807 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 DHX34Q14147 1143 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 FAM47CQ5HY64 1035 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 C6orf163Q5TEZ5 329 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 FAM47EQ6ZV65 393 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 SLC47A2Q86VL8 602 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 ARHGEF19Q8IW93 802 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 SPATA33Q96N06 139 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 KCTD10Q9H3F6 313 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 PPP1R9AQ9ULJ8 1098 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 CASZ1Q86V15 1759 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 ASTN1O14525 1302 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 COL14A1Q05707 1796 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 PHF2O75151 1096 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 SUN1O94901 812 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 ABCD1P33897 745 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 MDH1P40925 334 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 SNX16P57768 344 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 DLG4P78352 724 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 DARS2Q6PI48 645 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 TADA2BQ86TJ2 420 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 IL31RAQ8NI17 732 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 LRRC8CQ8TDW0 803 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 LRRC15Q8TF66 581 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 ARHGEF2Q92974 986 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 C18orf8Q96DM3 657 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 TBC1D31Q96DN5 1066 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 ERP44Q9BS26 406 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 BCAS3Q9H6U6 928 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■■■■□ 23.8
PTPRK-206ENST00000368215 CYP3A7-CYP3A51PA0A087WV96 503 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 MCF2LO15068 1137 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 PJA2O43164 708 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 CYP3A7P24462 503 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 GUCY2CP25092 1073 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 IFRD2Q12894 506 aaPredicted RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 NCOA4Q13772 614 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 LRRC31Q6UY01 552 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 RHOT1Q8IXI2 618 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 TSEN2Q8NCE0 465 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 RUBCNQ92622 972 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 CALR3Q96L12 384 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 MED10Q9BTT4 135 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 MRPL4Q9BYD3 311 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 ANKEF1Q9NU02 776 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 PSD3Q9NYI0 1048 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 DBR1Q9UK59 544 aaKnown RBP9.02□□□□□ -0.97
PTPRK-206ENST00000368215 LRP6O75581 1613 aa9.02□□□□□ -0.97
PTPRK-206ENST00000368215 PSMD10O75832 226 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 TJP3O95049 919 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 MAGEA9P43362 315 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 GPC3P51654 580 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 IL9RQ01113 521 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 PPP2R5CQ13362 524 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 WDR72Q3MJ13 1102 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 ENOSF1Q7L5Y1 443 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 RBBP8NLQ8NC74 664 aaPredicted RBP9.01□□□□□ -0.97
PTPRK-206ENST00000368215 ARHGEF26Q96DR7 871 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 C9orf72Q96LT7 481 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 TIPINQ9BVW5 301 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 GANQ9H2C0 597 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
PTPRK-206ENST00000368215 MED7O43513 233 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 TLR2O60603 784 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 CA4P22748 312 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 LSP1P33241 339 aa9.01□□□□□ -0.97
PTPRK-206ENST00000368215 PSMC1P62191 440 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms