RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 TNFSF9P41273 254 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 CCAR2Q8N163 923 aaKnown RBP25.14■■□□□ 1.62
SDF4-202ENST00000360001 PCSK9Q8NBP7 692 aaKnown RBP25.14■■□□□ 1.62
SDF4-202ENST00000360001 EHBP1Q8NDI1 1231 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 BEGAINQ9BUH8 593 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 GCOM2Q9BZD3 368 aaPredicted RBP25.14■■□□□ 1.62
SDF4-202ENST00000360001 CDT1Q9H211 546 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 PDE11AQ9HCR9 933 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 ZNHIT6Q9NWK9 470 aaKnown RBP25.14■■□□□ 1.62
SDF4-202ENST00000360001 GINS2Q9Y248 185 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 CETN1Q12798 172 aa25.14■■□□□ 1.61
SDF4-202ENST00000360001 KRT39Q6A163 491 aa25.14■■□□□ 1.61
SDF4-202ENST00000360001 GDF6Q6KF10 455 aaPredicted RBP25.14■■□□□ 1.61
SDF4-202ENST00000360001 TOGARAM2Q6ZUX3 1019 aa25.14■■□□□ 1.61
SDF4-202ENST00000360001 BRSK2Q8IWQ3 736 aa25.14■■□□□ 1.61
SDF4-202ENST00000360001 PDZD7Q9H5P4 517 aa25.14■■□□□ 1.61
SDF4-202ENST00000360001 HMX1Q9NP08 348 aaPredicted RBP25.14■■□□□ 1.61
SDF4-202ENST00000360001 AJAP1Q9UKB5 411 aaPredicted RBP25.14■■□□□ 1.61
SDF4-202ENST00000360001 CPSF3Q9UKF6 684 aaKnown RBP25.14■■□□□ 1.61
SDF4-202ENST00000360001 TULP1O00294 542 aaPredicted RBP25.13■■□□□ 1.61
SDF4-202ENST00000360001 CDK17Q00537 523 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 LHX8Q68G74 356 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 GJB7Q6PEY0 223 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 RNF180Q86T96 592 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 ZNF516Q92618 1163 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 CPB2Q96IY4 423 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 OSMRQ99650 979 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 NUCKS1Q9H1E3 243 aaKnown RBP25.13■■□□□ 1.61
SDF4-202ENST00000360001 COQ4Q9Y3A0 265 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 DNAH12Q6ZR08 3092 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 GRIN2DO15399 1336 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 HSPA6P17066 643 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 FGFR4P22455 802 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 TAF2Q6P1X5 1199 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 SV2AQ7L0J3 742 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 SESTD1Q86VW0 696 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 NME8Q8N427 588 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 SYN2Q92777 582 aaPredicted RBP25.13■■□□□ 1.61
SDF4-202ENST00000360001 FNBP1Q96RU3 617 aa25.13■■□□□ 1.61
SDF4-202ENST00000360001 LRRN2O75325 713 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 ERLIN2O94905 339 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 DARSP14868 501 aaKnown RBP25.12■■□□□ 1.61
SDF4-202ENST00000360001 IQCEQ6IPM2 695 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 C15orf39Q6ZRI6 1047 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 CEP120Q8N960 986 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 TRMT1Q9NXH9 659 aaKnown RBP25.12■■□□□ 1.61
SDF4-202ENST00000360001 APEX2Q9UBZ4 518 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 PTPRJQ12913 1337 aa25.12■■□□□ 1.61
SDF4-202ENST00000360001 FAM84AQ96KN4 292 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 FRMPD3Q5JV73 1810 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 MCF2P10911 925 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 FAM47CQ5HY64 1035 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 LMBRD2Q68DH5 695 aaPredicted RBP25.11■■□□□ 1.61
SDF4-202ENST00000360001 THNSL1Q8IYQ7 743 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 SEMA4DQ92854 862 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 CGRRF1Q99675 332 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 DESI2Q9BSY9 194 aa25.11■■□□□ 1.61
SDF4-202ENST00000360001 A0A1B0GUA9 196 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 TNNI1P19237 187 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 EIF4BP23588 611 aaKnown RBP25.1■■□□□ 1.61
SDF4-202ENST00000360001 CLCN1P35523 988 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 ACLYP53396 1101 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 JAM2P57087 298 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 SFMBT2Q5VUG0 894 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 PHLDB3Q6NSJ2 640 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 ZNF710Q8N1W2 664 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 TAS1R2Q8TE23 839 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 TMEM40Q8WWA1 233 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 AIPL1Q9NZN9 384 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 ARHGAP20Q9P2F6 1191 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 MYO6Q9UM54 1294 aa25.1■■□□□ 1.61
SDF4-202ENST00000360001 RAPGEF1Q13905 1077 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 SNX17Q15036 470 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 GPIHBP1Q8IV16 184 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 FBXL13Q8NEE6 735 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 SH3TC2Q8TF17 1288 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 SPAG5Q96R06 1193 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 WBP1LQ9NX94 342 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 PPP2R2CQ9Y2T4 447 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 DAAM1Q9Y4D1 1078 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 CEP350Q5VT06 3117 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 BRCA2P51587 3418 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 C4BPAP04003 597 aaKnown RBP25.09■■□□□ 1.61
SDF4-202ENST00000360001 CRYBB1P53674 252 aaPredicted RBP25.09■■□□□ 1.61
SDF4-202ENST00000360001 PCBP1Q15365 356 aaKnown RBP eCLIP25.09■■□□□ 1.614e-7■■■■□ 19.5
SDF4-202ENST00000360001 ENOX2Q16206 610 aaKnown RBP25.09■■□□□ 1.61
SDF4-202ENST00000360001 ZACNQ401N2 412 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 HGSNATQ68CP4 663 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 CATSPER4Q7RTX7 472 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 SERINC5Q86VE9 423 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 PPP1R13BQ96KQ4 1090 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 NHEJ1Q9H9Q4 299 aaPredicted RBP25.09■■□□□ 1.61
SDF4-202ENST00000360001 DNAJC12Q9UKB3 198 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 ADGRG1Q9Y653 693 aa25.09■■□□□ 1.61
SDF4-202ENST00000360001 CABYRO75952 493 aa25.08■■□□□ 1.61
SDF4-202ENST00000360001 PLEKP08567 350 aaPredicted RBP25.08■■□□□ 1.61
SDF4-202ENST00000360001 HOXA11P31270 313 aaPredicted RBP25.08■■□□□ 1.61
SDF4-202ENST00000360001 TMEM192Q8IY95 271 aa25.08■■□□□ 1.61
SDF4-202ENST00000360001 WNT8BQ93098 351 aa25.08■■□□□ 1.61
SDF4-202ENST00000360001 RAB20Q9NX57 234 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms