RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CLEC11AQ9Y240 323 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.15□□□□□ -1.427e-7■■■□□ 17
CD47-201ENST00000355354 OBSL1O75147 1896 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 CHMP2AO43633 222 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 UGT1A9O60656 530 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 CCNE2O96020 404 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 KRT10P13645 584 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 KIF11P52732 1056 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 POLR2FP61218 127 aaKnown RBP6.15□□□□□ -1.42
CD47-201ENST00000355354 ZNF844Q08AG5 666 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 TBC1D8BQ0IIM8 1120 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 ZNF568Q3ZCX4 644 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 ZBTB46Q86UZ6 589 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 FCHSD1Q86WN1 690 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 OSBPL9Q96SU4 736 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 REEP2Q9BRK0 252 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 STRA6Q9BX79 667 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 UGT1A7Q9HAW7 530 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 UGT1A10Q9HAW8 530 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 UGT1A8Q9HAW9 530 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 ANKIB1Q9P2G1 1089 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 HMGXB4Q9UGU5 601 aa6.15□□□□□ -1.42
CD47-201ENST00000355354 MTCL1Q9Y4B5 1905 aaKnown RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 SMCO2A6NFE2 343 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 DDX3YO15523 660 aaKnown RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 FUT4P22083 530 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 ADORA2AP29274 412 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 ABCG1P45844 678 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 GRB14Q14449 540 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 FAM110CQ1W6H9 321 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 FAM83BQ5T0W9 1011 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 CSGALNACT2Q8N6G5 542 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 PRELID2Q8N945 189 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 ETNPPLQ8TBG4 499 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 NDRG1Q92597 394 aaKnown RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 KRT12Q99456 494 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 HEMGNQ9BXL5 484 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 WDR11Q9BZH6 1224 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 LTB4R2Q9NPC1 389 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 GRHL1Q9NZI5 618 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 SNX12Q9UMY4 172 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 ZNF536O15090 1300 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 AKR1B15C9JRZ8 316 aaPredicted RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 PRPF3O43395 683 aaKnown RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 CYP3A5P20815 502 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 ITGB8P26012 769 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 PSMA5P28066 241 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 TXLNAP40222 546 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 CD300CQ08708 224 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 TRIM32Q13049 653 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 DRAP1Q14919 205 aaPredicted RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 PAPD7Q5XG87 772 aaKnown RBP6.15□□□□□ -1.43
CD47-201ENST00000355354 PDXDC1Q6P996 788 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 C6orf89Q6UWU4 347 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 ARMC9Q7Z3E5 817 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 TMPRSS6Q8IU80 811 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 MORC4Q8TE76 937 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 MYO6Q9UM54 1294 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 PCDHB13Q9Y5F0 798 aa6.15□□□□□ -1.43
CD47-201ENST00000355354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 LGALS16A8MUM7 142 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CTNND1O60716 968 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 SGPL1O95470 568 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 PDCP20941 246 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 SP4Q02446 784 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 QRICH1Q2TAL8 776 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 P2RY11Q96G91 374 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 PRDM8Q9NQV8 689 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 GINM1Q9NU53 330 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CYB561D2O14569 222 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 AVILO75366 819 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CAPN15O75808 1086 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 JUNP05412 331 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 FGFR4P22455 802 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 PAX7P23759 505 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CDC25BP30305 580 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 WDR4P57081 412 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 PRKCZQ05513 592 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 HIC1Q14526 733 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 MUM1L1Q5H9M0 696 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CCDC158Q5M9N0 1113 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 NAPEPLDQ6IQ20 393 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 TRIM59Q8IWR1 403 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 ZSCAN29Q8IWY8 852 aaPredicted RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 PHF12Q96QT6 1004 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 NUP58Q9BVL2 599 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 ZMYND12Q9H0C1 365 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 ELP3Q9H9T3 547 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 BTBD7Q9P203 1132 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 NAGPAQ9UK23 515 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 TMEM59LQ9UK28 342 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 WNK2Q9Y3S1 2297 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 TCF20Q9UGU0 1960 aaKnown RBP6.14□□□□□ -1.43
CD47-201ENST00000355354 MAGEB6P1A0A0J9YX57 407 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 E2F8A0AVK6 867 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 HMX2A2RU54 273 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 CCDC85CA6NKD9 419 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 EFCAB8A8MWE9 144 aa6.14□□□□□ -1.43
CD47-201ENST00000355354 ADRB2P07550 413 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms