RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KDM1AO60341 852 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 E2F6O75461 281 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 CRKP46108 304 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 GRIN1Q05586 938 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 ATL2Q8NHH9 583 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 SLC30A5Q8TAD4 765 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 ZNF668Q96K58 619 aaPredicted RBP17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 UCHL3P15374 230 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 POLR3CQ9BUI4 534 aaPredicted RBP17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 TDRD3Q9H7E2 651 aaKnown RBP17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 TBC1D22BQ9NU19 505 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 EHD2Q9NZN4 543 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 TRIM33Q9UPN9 1127 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 F5H6K3 240 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 M0QYV0 167 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 PDXKO00764 312 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 KLRC3Q07444 240 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 FOXR1Q6PIV2 292 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 C4orf33Q8N1A6 199 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 ENGASEQ8NFI3 743 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 GOLPH3Q9H4A6 298 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 MAGEA13PA6NCF6 341 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 XPAP23025 273 aaPredicted RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 HIF1AQ16665 826 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 PDHBP11177 359 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 TYK2P29597 1187 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 VHLP40337 213 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ROR1Q01973 937 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 RABL6Q3YEC7 729 aaPredicted RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 TBC1D23Q9NUY8 699 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 RAB21Q9UL25 225 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 PYGBP11216 843 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 LRRC36Q1X8D7 754 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ZNF568Q3ZCX4 644 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 HEATR6Q6AI08 1181 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 C1orf228Q6PIY5 440 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ABI1Q8IZP0 508 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 NAF1Q96HR8 494 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 CELF4Q9BZC1 486 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 CCDC22O60826 627 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ASNSP08243 561 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 CCNA1P78396 465 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 RBM43Q6ZSC3 357 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 EP400NLQ6ZTU2 488 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ARHGAP22Q7Z5H3 698 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 CEP19Q96LK0 163 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 NPHS2Q9NP85 383 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ARAP3Q8WWN8 1544 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ENO1P06733 434 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 NQO1P15559 274 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 RFX1P22670 979 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 TBXAS1P24557 533 aaPredicted RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 KPNB1Q14974 876 aaKnown RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 NEDD1Q8NHV4 660 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 FAM84BQ96KN1 310 aaPredicted RBP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 RBM15Q96T37 977 aaKnown RBP eCLIP17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 GABBR1Q9UBS5 961 aa17.41■□□□□ 0.38
SH3RF1-201ENST00000284637 ZNF335Q9H4Z2 1342 aaPredicted RBP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 TYW5A2RUC4 315 aaKnown RBP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 RTN2O75298 545 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 ALDH18A1P54886 795 aaKnown RBP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 NSUN2Q08J23 767 aaKnown RBP eCLIP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 PDIA5Q14554 519 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 SWSAP1Q6NVH7 229 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 ATXN7L3BQ96GX2 97 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 SH2D3AQ9BRG2 576 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 MYMKA6NI61 221 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 FSBPO95073 299 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 AKR1B1P15121 316 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 SMARCA1P28370 1054 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 DSTYKQ6XUX3 929 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 ALKBH8Q96BT7 664 aaKnown RBP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 CCDC90BQ9GZT6 254 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 H3BRJ5 948 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 CDH16O75309 829 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 MYBL1P10243 752 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 PAMP19021 973 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 CATSPER4Q7RTX7 472 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 ERP27Q96DN0 273 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 THAP11Q96EK4 314 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 C7orf25Q9BPX7 421 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 SLC9A1P19634 815 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 CDH6P55285 790 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 KRT76Q01546 638 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 PREPLQ4J6C6 727 aaPredicted RBP17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 ANGPTL8Q6UXH0 198 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 MFN1Q8IWA4 741 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 FSD1LQ9BXM9 530 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 WWP1Q9H0M0 922 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 KDM4CQ9H3R0 1056 aa17.4■□□□□ 0.38
SH3RF1-201ENST00000284637 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.38
SH3RF1-201ENST00000284637 PHF2O75151 1096 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms