RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 RUNDC3BQ96NL0 473 aa16.36■□□□□ 0.21
DDX56-201ENST00000258772 ADAM7Q9H2U9 754 aa16.36■□□□□ 0.21
DDX56-201ENST00000258772 AZI2Q9H6S1 392 aa16.36■□□□□ 0.21
DDX56-201ENST00000258772 UVRAGQ9P2Y5 699 aa16.36■□□□□ 0.21
DDX56-201ENST00000258772 TBX20Q9UMR3 447 aa16.36■□□□□ 0.21
DDX56-201ENST00000258772 RARGP13631 454 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 CNGA1P29973 690 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 KCNJ1P48048 391 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 GPC3P51654 580 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 RWDD2BP57060 319 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 IFI35P80217 286 aaPredicted RBP16.35■□□□□ 0.21
DDX56-201ENST00000258772 CDR2Q01850 454 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 ADCY2Q08462 1091 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 SLMAPQ14BN4 828 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 FAM102BQ5T8I3 360 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 CROCCP2Q86T23 111 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 SYTL5Q8TDW5 730 aaPredicted RBP16.35■□□□□ 0.21
DDX56-201ENST00000258772 POP1Q99575 1024 aaKnown RBP16.35■□□□□ 0.21
DDX56-201ENST00000258772 TMEM109Q9BVC6 243 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 TMEM8AQ9HCN3 771 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 EXOC7Q9UPT5 735 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 PTPN22Q9Y2R2 807 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 C21orf2O43822 256 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 ASNSP08243 561 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 SMTNP53814 917 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 PSMC5P62195 406 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 XKR9Q5GH70 373 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 FKBP1CQ5VVH2 108 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 CYFIP1Q7L576 1253 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 TMEM161BQ8NDZ6 487 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 ZNF317Q96PQ6 595 aaPredicted RBP16.35■□□□□ 0.21
DDX56-201ENST00000258772 TAAR1Q96RJ0 339 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
DDX56-201ENST00000258772 ACTR5Q9H9F9 607 aaPredicted RBP16.35■□□□□ 0.21
DDX56-201ENST00000258772 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
DDX56-201ENST00000258772 PASKQ96RG2 1323 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 DNM1LO00429 736 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 RIPK2O43353 540 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 AGTP01019 485 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 FGFR4P22455 802 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 HSPA1LP34931 641 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 PDE6CP51160 858 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
DDX56-201ENST00000258772 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
DDX56-201ENST00000258772 DDX1Q92499 740 aaKnown RBP16.34■□□□□ 0.21
DDX56-201ENST00000258772 NT5C1BQ96P26 610 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 ZNF341Q9BYN7 854 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 LRRC19Q9H756 370 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 ATP9AO75110 1047 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 EIF2AK2P19525 551 aaKnown RBP16.34■□□□□ 0.21
DDX56-201ENST00000258772 SPRED3Q2MJR0 410 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 PLA2G4FQ68DD2 849 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 ACAD10Q6JQN1 1059 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 MAP4K3Q8IVH8 894 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 FBXL13Q8NEE6 735 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 UHMK1Q8TAS1 419 aaKnown RBP16.34■□□□□ 0.21
DDX56-201ENST00000258772 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 PSPC1Q8WXF1 523 aaKnown RBP16.34■□□□□ 0.21
DDX56-201ENST00000258772 SELENOSQ9BQE4 189 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 ANKEF1Q9NU02 776 aa16.34■□□□□ 0.21
DDX56-201ENST00000258772 RASSF9O75901 435 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 NPTX2P47972 431 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 MNAT1P51948 309 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 PGM5Q15124 567 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 SWT1Q5T5J6 900 aaKnown RBP16.33■□□□□ 0.2
DDX56-201ENST00000258772 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 FAM83AQ86UY5 434 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 EPS8L3Q8TE67 593 aaKnown RBP16.33■□□□□ 0.2
DDX56-201ENST00000258772 KIFAP3Q92845 792 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 CCDC114Q96M63 670 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 MFSD14AQ96MC6 490 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 KIFC3Q9BVG8 833 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 RAVER2Q9HCJ3 691 aaKnown RBP16.33■□□□□ 0.2
DDX56-201ENST00000258772 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
DDX56-201ENST00000258772 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 RAB20Q9NX57 234 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 FSCN2O14926 492 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 CCNE2O96020 404 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 MYCLP12524 364 aaPredicted RBP16.33■□□□□ 0.2
DDX56-201ENST00000258772 JAK3P52333 1124 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 TNFAIP8L3Q5GJ75 292 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 TMC2Q8TDI7 906 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 DHX38Q92620 1227 aaKnown RBP16.33■□□□□ 0.2
DDX56-201ENST00000258772 FBXL18Q96ME1 805 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
DDX56-201ENST00000258772 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 WDR64B1ANS9 1081 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 RASGRF2O14827 1237 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 CLDN3O15551 220 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 ECEL1O95672 775 aa16.32■□□□□ 0.2
DDX56-201ENST00000258772 RPS6P62753 249 aaKnown RBP16.32■□□□□ 0.2
DDX56-201ENST00000258772 MAP3K10Q02779 954 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms