RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 GTF2H1P32780 548 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 ARHGAP25P42331 645 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 KRT83P78385 493 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 CYP27A1Q02318 531 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 MFSD10Q14728 455 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 PSMD6Q15008 389 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 FSCN1Q16658 493 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 ARHGAP29Q52LW3 1261 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 MFSD14CQ5VZR4 134 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 TSHZ1Q6ZSZ6 1077 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 KIAA0319LQ8IZA0 1049 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 TCHPQ9BT92 498 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 IRX2Q9BZI1 471 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 RBAKQ9NYW8 714 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 HAS3O00219 553 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 DUSP11O75319 330 aaKnown RBP21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 PRPF4BQ13523 1007 aaKnown RBP21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 ASIC2Q16515 512 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 ERCC6LQ2NKX8 1250 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 SEZ6Q53EL9 994 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 NFRKBQ6P4R8 1299 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 SV2AQ7L0J3 742 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 STK33Q9BYT3 514 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 PDE11AQ9HCR9 933 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 PTPRHQ9HD43 1115 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 F8VZ95 297 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 AKR1B10O60218 316 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 CSDE1O75534 798 aaKnown RBP21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 PNMA6AP0CW24 399 aaPredicted RBP21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 RFX1P22670 979 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 MCL1Q07820 350 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 KLHL30Q0D2K2 578 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 ZBTB33Q86T24 672 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 CFHR5Q9BXR6 569 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 GPR88Q9GZN0 384 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 DAAM1Q9Y4D1 1078 aa21.31■■□□□ 1
TNFRSF1A-201ENST00000162749 CITO14578 2027 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 MYL3P08590 195 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 ATF7IP2Q5U623 682 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 TAS1R2Q8TE23 839 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 ZNF516Q92618 1163 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 SEMA4DQ92854 862 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 FAM84AQ96KN4 292 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 FNBP1Q96RU3 617 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 HAUS4Q9H6D7 363 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 PRMT7Q9NVM4 692 aaPredicted RBP21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 TFR2Q9UP52 801 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 PTPRJQ12913 1337 aa21.3■■□□□ 1
TNFRSF1A-201ENST00000162749 MBLAC1A4D2B0 266 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 TRPA1O75762 1119 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 CASQ1P31415 396 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 TNFSF9P41273 254 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 PRKCIP41743 596 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 PSEN2P49810 448 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 GPC3P51654 580 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 TRIM32Q13049 653 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 DRAP1Q14919 205 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 ENOX2Q16206 610 aaKnown RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 AMHR2Q16671 573 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 FAM187BQ17R55 369 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 C15orf39Q6ZRI6 1047 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 ZNF784Q8NCA9 323 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 FBXL13Q8NEE6 735 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 CNTNAP2Q9UHC6 1331 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 MYADML2A6NDP7 307 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 C6orf222P0C671 652 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 ADAM17P78536 824 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 PURAQ00577 322 aaKnown RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 GFPT1Q06210 699 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 HIC1Q14526 733 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 KIF22Q14807 665 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 SPA17Q15506 151 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 LMBRD2Q68DH5 695 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 MPZL3Q6UWV2 235 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 ARHGEF19Q8IW93 802 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 NLRP7Q8WX94 980 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 RNF186Q9NXI6 227 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 TRIP11Q15643 1979 aa21.29■■□□□ 1
TNFRSF1A-201ENST00000162749 RCCD1A6NED2 376 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 OGTO15294 1046 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 ZEB2O60315 1214 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 TNNI1P19237 187 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 PTK2Q05397 1052 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 FBXO38Q6PIJ6 1188 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 CDR2LQ86X02 465 aaPredicted RBP21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 UBE2TQ9NPD8 197 aaPredicted RBP21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 RAB20Q9NX57 234 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 TRIM10Q9UDY6 481 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 SOX5P35711 763 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 STAT1P42224 750 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 ZNF568Q3ZCX4 644 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 EEF1DP3Q658K8 133 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 ZNF662Q6ZS27 426 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 KIAA1328Q86T90 577 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 BRSK2Q8IWQ3 736 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 IFIH1Q9BYX4 1025 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 LACRTQ9GZZ8 138 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 TNFSF13BQ9Y275 285 aa21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 BZW2Q9Y6E2 419 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-201ENST00000162749 RBAK-RBAKDNI3L0D1 243 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms