RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 MCH2P36032 473 aa-0.58□□□□□ -2.5
snR48snR48 MAL32P38158 584 aa-0.58□□□□□ -2.5
snR48snR48 YPC1P38298 316 aa-0.58□□□□□ -2.5
snR48snR48 YHR122WP38829 231 aa-0.58□□□□□ -2.5
snR48snR48 MAL12P53341 584 aa-0.58□□□□□ -2.5
snR48snR48 UBC7Q02159 165 aa-0.58□□□□□ -2.5
snR48snR48 YPR1Q12458 312 aa-0.58□□□□□ -2.5
snR48snR48 YPL119C-AQ3E751 87 aa-0.58□□□□□ -2.5
snR48snR48 CAJ1P39101 391 aa-0.59□□□□□ -2.5
snR48snR48 PRP39P39682 629 aaKnown RBP-0.59□□□□□ -2.5
snR48snR48 MLC1P53141 149 aa-0.59□□□□□ -2.5
snR48snR48 SML1Q04964 104 aa-0.59□□□□□ -2.5
snR48snR48 PST1Q12355 444 aa-0.59□□□□□ -2.5
snR48snR48 SPO24Q3E752 67 aa-0.59□□□□□ -2.5
snR48snR48 YHR032W-AP0C5N6 59 aa-0.6□□□□□ -2.51
snR48snR48 RNA15P25299 296 aaPredicted RBP-0.6□□□□□ -2.51
snR48snR48 MDH3P32419 343 aaKnown RBP RIP-Chip data-0.6□□□□□ -2.51not detected
snR48snR48 DRE2P36152 348 aa-0.6□□□□□ -2.51
snR48snR48 YHI9P38765 294 aa-0.6□□□□□ -2.51
snR48snR48 YHR035WP38769 630 aa-0.6□□□□□ -2.51
snR48snR48 ALP1P38971 573 aa-0.6□□□□□ -2.51
snR48snR48 SHQ1P40486 507 aaPredicted RBP-0.6□□□□□ -2.51
snR48snR48 AGE2P40529 298 aa-0.6□□□□□ -2.51
snR48snR48 RVB1Q03940 463 aaKnown RBP-0.6□□□□□ -2.51
snR48snR48 RRP42Q12277 265 aaPredicted RBP-0.6□□□□□ -2.51
snR48snR48 SMT3Q12306 101 aaKnown RBP-0.6□□□□□ -2.51
snR48snR48 SLH1P53327 1967 aaKnown RBP-0.6□□□□□ -2.51
snR48snR48 RPL6BP05739 176 aaKnown RBP-0.61□□□□□ -2.51
snR48snR48 FAA1P30624 700 aaKnown RBP-0.61□□□□□ -2.51
snR48snR48 AEP1P32493 518 aa-0.61□□□□□ -2.51
snR48snR48 JNM1P36224 373 aa-0.61□□□□□ -2.51
snR48snR48 ERV15P38312 142 aa-0.61□□□□□ -2.51
snR48snR48 DOG1P38774 246 aa-0.61□□□□□ -2.51
snR48snR48 TEM1P38987 245 aa-0.61□□□□□ -2.51
snR48snR48 YJL055WP47044 245 aa-0.61□□□□□ -2.51
snR48snR48 SRB7P47822 140 aa-0.61□□□□□ -2.51
snR48snR48 YPT32P51996 222 aaKnown RBP-0.61□□□□□ -2.51
snR48snR48 SWC4P53201 476 aa-0.61□□□□□ -2.51
snR48snR48 YGR168CP53293 376 aa-0.61□□□□□ -2.51
snR48snR48 RPL6AQ02326 176 aaKnown RBP-0.61□□□□□ -2.51
snR48snR48 YOL160WQ08321 113 aa-0.61□□□□□ -2.51
snR48snR48 SLD7Q08457 257 aa-0.61□□□□□ -2.51
snR48snR48 YMR316C-AI2HB70 103 aa-0.62□□□□□ -2.51
snR48snR48 UBA1P22515 1024 aaKnown RBP-0.62□□□□□ -2.51
snR48snR48 RPN12P32496 274 aa-0.62□□□□□ -2.51
snR48snR48 UIP5P36137 443 aa-0.62□□□□□ -2.51
snR48snR48 OST2P46964 130 aa-0.62□□□□□ -2.51
snR48snR48 YJL028WP47062 111 aa-0.62□□□□□ -2.51
snR48snR48 YJR079WP47126 109 aa-0.62□□□□□ -2.51
snR48snR48 UBC13P52490 153 aa-0.62□□□□□ -2.51
snR48snR48 YGR219WP53307 113 aa-0.62□□□□□ -2.51
snR48snR48 FMP41P53889 259 aaKnown RBP-0.62□□□□□ -2.51
snR48snR48 UTP6Q02354 440 aaKnown RBP-0.62□□□□□ -2.51
snR48snR48 BOP2Q06150 570 aa-0.62□□□□□ -2.51
snR48snR48 TAZ1Q06510 381 aa-0.62□□□□□ -2.51
snR48snR48 YPL162CQ12042 273 aa-0.62□□□□□ -2.51
snR48snR48 TFB5Q3E7C1 72 aaPredicted RBP-0.62□□□□□ -2.51
snR48snR48 FKS1P38631 1876 aaKnown RBP-0.63□□□□□ -2.51
snR48snR48 MSS116P15424 664 aaKnown RBP-0.63□□□□□ -2.51
snR48snR48 OAC1P32332 324 aa-0.63□□□□□ -2.51
snR48snR48 PXA2P34230 853 aa-0.63□□□□□ -2.51
snR48snR48 HMT1P38074 348 aa-0.63□□□□□ -2.51
snR48snR48 YER076CP40049 302 aa-0.63□□□□□ -2.51
snR48snR48 YKE4P40544 346 aa-0.63□□□□□ -2.51
snR48snR48 GDS1P41913 522 aa-0.63□□□□□ -2.51
snR48snR48 YNL146WP53906 100 aa-0.63□□□□□ -2.51
snR48snR48 RSM10Q03201 203 aa-0.63□□□□□ -2.51
snR48snR48 DPP1Q05521 289 aa-0.63□□□□□ -2.51
snR48snR48 SMC6Q12749 1114 aa-0.63□□□□□ -2.51
snR48snR48 AQY2P0CD90 149 aa-0.64□□□□□ -2.51
snR48snR48 RPS0AP32905 252 aaKnown RBP-0.64□□□□□ -2.51
snR48snR48 SMD3P43321 101 aaKnown RBP-0.64□□□□□ -2.51
snR48snR48 SPC19Q03954 165 aa-0.64□□□□□ -2.51
snR48snR48 YPR064WQ12492 139 aa-0.64□□□□□ -2.51
snR48snR48 IZH4Q99393 312 aa-0.64□□□□□ -2.51
snR48snR48 MSB2P32334 1306 aa-0.64□□□□□ -2.51
snR48snR48 RDS1P25611 832 aa-0.65□□□□□ -2.51
snR48snR48 CAM1P29547 415 aaKnown RBP-0.65□□□□□ -2.51
snR48snR48 RIO2P40160 425 aaKnown RBP-0.65□□□□□ -2.51
snR48snR48 SOK1P40317 901 aa-0.65□□□□□ -2.51
snR48snR48 DBP6P53734 629 aaKnown RBP-0.65□□□□□ -2.51
snR48snR48 SED1Q01589 338 aa-0.65□□□□□ -2.51
snR48snR48 YMR209CQ03648 457 aa-0.65□□□□□ -2.51
snR48snR48 YML018CQ03730 393 aa-0.65□□□□□ -2.51
snR48snR48 PEX10Q05568 337 aa-0.65□□□□□ -2.51
snR48snR48 PBP4Q07362 185 aaKnown RBP-0.65□□□□□ -2.51
snR48snR48 BUD21Q08492 214 aaPredicted RBP-0.65□□□□□ -2.51
snR48snR48 YOR114WQ12219 294 aa-0.65□□□□□ -2.51
snR48snR48 STE3P06783 470 aa-0.66□□□□□ -2.52
snR48snR48 UGA1P17649 471 aa-0.66□□□□□ -2.52
snR48snR48 MNE1P24720 663 aa-0.66□□□□□ -2.52
snR48snR48 VMA11P32842 164 aa-0.66□□□□□ -2.52
snR48snR48 AGX1P43567 385 aa-0.66□□□□□ -2.52
snR48snR48 RPA34P47006 233 aaPredicted RBP-0.66□□□□□ -2.52
snR48snR48 JHD2P47156 728 aaPredicted RBP-0.66□□□□□ -2.52
snR48snR48 SAM4Q08985 325 aaKnown RBP-0.66□□□□□ -2.52
snR48snR48 AKR2Q12013 749 aa-0.66□□□□□ -2.52
snR48snR48 RPL31AP0C2H8 113 aaKnown RBP-0.67□□□□□ -2.52
snR48snR48 PBN1P25580 416 aa-0.67□□□□□ -2.52
snR48snR48 SUA5P32579 426 aa-0.67□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms