RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	CDC33	P07260	213 aa	Known RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	GAC1	P28006	793 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	HOM6	P31116	359 aa	Known RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	SHO1	P40073	367 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	NTA1	P40354	457 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	YJR120W	P47157	116 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	GTR2	P53290	341 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	RSM10	Q03201	203 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	GOT1	Q03554	138 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	BSP1	Q06604	576 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	NAT5	Q08689	176 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	PRR2	Q12310	699 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	TRM13	Q12383	476 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	FOL3	Q12676	427 aa	Predicted RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	SAG1	P20840	650 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	MSK1	P32048	576 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	OMA1	P36163	345 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	AGP2	P38090	596 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	LSM2	P38203	95 aa	Known RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	MTC4	P38335	694 aa	Known RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	ATF1	P40353	525 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	SEC24	P40482	926 aa	Known RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	ULI1	P43604	169 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	YGR053C	P53234	283 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	MRPL19	P53875	158 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	ASI3	P53983	676 aa		6.58	□□□□□ -1.36
MSB3	YNL293W	RPL13A	Q12690	199 aa	Predicted RBP	6.58	□□□□□ -1.36
MSB3	YNL293W	RPS25B	P0C0T4	108 aa	Known RBP	6.57	□□□□□ -1.36
MSB3	YNL293W	YEL076C-A	P0CX16	216 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	YLR464W	P0CX17	216 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	ERG3	P32353	365 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	YEL076C	P39971	216 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	MOB1	P40484	314 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	PAU15	P40585	124 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	TAH11	P47112	604 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	SBH2	P52871	88 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	AAH1	P53909	347 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	PLB2	Q03674	706 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	NUS1	Q12063	375 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	RPS25A	Q3E792	108 aa	Predicted RBP	6.57	□□□□□ -1.36
MSB3	YNL293W	YKL033W-A	Q86ZR7	236 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	UBR1	P19812	1950 aa		6.57	□□□□□ -1.36
MSB3	YNL293W	MSW1	P04803	379 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	TIR1	P10863	254 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	ERS1	P17261	260 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	RPB5	P20434	215 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	MSN1	P22148	382 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	AAR2	P32357	355 aa	Predicted RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	NTF2	P33331	125 aa	Known RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	TSL1	P38427	1098 aa	Known RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	ASP1	P38986	381 aa	Predicted RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	YFL052W	P43551	465 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	YJL132W	P47014	750 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	ZAP1	P47043	880 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	PET130	P47065	347 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	RRT6	P53117	311 aa	Predicted RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	YGR250C	P53316	781 aa	Known RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	RPS15	Q01855	142 aa	Known RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	CUR1	Q06469	252 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	YLR030W	Q07967	263 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	MES1	P00958	751 aa	Known RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	SYN8	P31377	255 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	ARO4	P32449	370 aa	Known RBP	6.56	□□□□□ -1.36
MSB3	YNL293W	SEC17	P32602	292 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	TIP20	P33891	701 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	GPG1	P53130	126 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	RSM23	Q01163	450 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	UBP16	Q02863	499 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	YLR413W	Q06689	675 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	NDJ1	Q12366	352 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	SFG1	Q12507	346 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	MHF2	Q3E829	80 aa		6.56	□□□□□ -1.36
MSB3	YNL293W	RPL27A	P0C2H6	136 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	RPL27B	P0C2H7	136 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	MAK31	P23059	88 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	YCR023C	P25351	611 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	PUT3	P25502	979 aa	Predicted RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	MTH1	P35198	433 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	SFK1	P35735	353 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	PMU1	P36069	295 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	RIB1	P38066	345 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	DER1	P38307	211 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	PRE6	P40303	254 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	MIC26	P50087	233 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	RIB4	P50861	169 aa	Predicted RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	EXG2	P52911	562 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	VPS73	P53142	486 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	THG1	P53215	237 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	YIP3	P53633	176 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	NUP100	Q02629	959 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	FIT1	Q04433	528 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	AVO2	Q04749	426 aa		6.55	□□□□□ -1.36
MSB3	YNL293W	ERP1	Q05359	219 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	TY1B-NL2	Q99337	1749 aa	Known RBP	6.55	□□□□□ -1.36
MSB3	YNL293W	QCR7	P00128	127 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	ART10	P18634	518 aa	Known RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	YCK2	P23292	546 aa	Known RBP	6.54	□□□□□ -1.36
MSB3	YNL293W	MRP17	P28778	131 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	NTH1	P32356	751 aa		6.54	□□□□□ -1.36
MSB3	YNL293W	FMT1	P32785	401 aa		6.54	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms