RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PARP2Q9UGN5 583 aa18.53■□□□□ 0.56
PHGDH-213ENST00000641272 INPPL1O15357 1258 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 ADH1AP07327 375 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 SPATA31D3P0C874 917 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 SPATA31C1P0DKV0 1188 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 LIG1P18858 919 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 SPATA31D4Q6ZUB0 917 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 HACE1Q8IYU2 909 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 HASPINQ8TF76 798 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 USP20Q9Y2K6 914 aa18.52■□□□□ 0.56
PHGDH-213ENST00000641272 TTLL13PA6NNM8 815 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 H0Y858 1186 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 RFPL2O75678 378 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 GLUD1P00367 558 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 RPL17P18621 184 aaKnown RBP18.51■□□□□ 0.55
PHGDH-213ENST00000641272 PCBP1Q15365 356 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■□□ 14.6
PHGDH-213ENST00000641272 TMEM132AQ24JP5 1023 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 FUT10Q6P4F1 479 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 CATSPER3Q86XQ3 398 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 RNF168Q8IYW5 571 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-213ENST00000641272 TMEM105Q8N8V8 129 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 BSNDQ8WZ55 320 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 ACSF2Q96CM8 615 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-213ENST00000641272 PRRX2Q99811 253 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 STK39Q9UEW8 545 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 USTQ9Y2C2 406 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 GIT1Q9Y2X7 761 aa18.51■□□□□ 0.55
PHGDH-213ENST00000641272 OR52Z1P0C646 297 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 POU5F1BQ06416 359 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 GRIK3Q13003 919 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 SAFBQ15424 915 aaKnown RBP eCLIP18.5■□□□□ 0.55
PHGDH-213ENST00000641272 ZNF174Q15697 407 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 PALB2Q86YC2 1186 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 ZBTB8OSQ8IWT0 167 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 PLCD3Q8N3E9 789 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 GSTCDQ8NEC7 633 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 ATOH1Q92858 354 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-213ENST00000641272 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 PAAF1Q9BRP4 392 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 KIFC3Q9BVG8 833 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 NFKBIZQ9BYH8 718 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 GPR62Q9BZJ7 368 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 MFSD1Q9H3U5 465 aa18.5■□□□□ 0.55
PHGDH-213ENST00000641272 CLUHO75153 1309 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 CASTOR2A6NHX0 329 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 N4BP1O75113 896 aaKnown RBP18.49■□□□□ 0.55
PHGDH-213ENST00000641272 NR1I2O75469 434 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 EDN1P05305 212 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 GBP2P32456 591 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-213ENST00000641272 DSG1Q02413 1049 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 NBR1Q14596 966 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 KIAA0319Q5VV43 1072 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 CDCA2Q69YH5 1023 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-213ENST00000641272 OTOP3Q7RTS5 596 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 MCPH1Q8NEM0 835 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 FLCNQ8NFG4 579 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 RIN2Q8WYP3 895 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-213ENST00000641272 COLEC11Q9BWP8 271 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 CXCL16Q9H2A7 254 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 PDZD7Q9H5P4 517 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 TUFT1Q9NNX1 390 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 PRMT7Q9NVM4 692 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-213ENST00000641272 ADAM28Q9UKQ2 775 aa18.49■□□□□ 0.55
PHGDH-213ENST00000641272 MTCL1Q9Y4B5 1905 aaKnown RBP18.49■□□□□ 0.55
PHGDH-213ENST00000641272 DOCK8Q8NF50 2099 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 CCDC195A0A1B0GUA6 201 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 ARHGEF35A5YM69 484 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 EFEMP2O95967 443 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 CWF19L1Q69YN2 538 aaKnown RBP18.48■□□□□ 0.55
PHGDH-213ENST00000641272 PRSS55Q6UWB4 352 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-213ENST00000641272 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 C15orf39Q6ZRI6 1047 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 SMG7Q92540 1137 aaKnown RBP18.48■□□□□ 0.55
PHGDH-213ENST00000641272 SSX2IPQ9Y2D8 614 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 VWA8A3KMH1 1905 aa18.48■□□□□ 0.55
PHGDH-213ENST00000641272 CACNA1HO95180 2353 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 A0A1B0GUA9 196 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 NARSO43776 548 aaKnown RBP18.47■□□□□ 0.55
PHGDH-213ENST00000641272 RECQL4O94761 1208 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 KIF4AO95239 1232 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 PRKCBP05771 671 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 GNL2Q13823 731 aaKnown RBP18.47■□□□□ 0.55
PHGDH-213ENST00000641272 HSP90AA2PQ14568 343 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-213ENST00000641272 TTC38Q5R3I4 469 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 EEF1DP3Q658K8 133 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 PADI6Q6TGC4 694 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 GET4Q7L5D6 327 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-213ENST00000641272 ST13P5Q8NFI4 369 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-213ENST00000641272 ERMNQ8TAM6 284 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 RSAD2Q8WXG1 361 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 RXFP1Q9HBX9 757 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 SNTG2Q9NY99 539 aa18.47■□□□□ 0.55
PHGDH-213ENST00000641272 PTGESO14684 152 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 N4BP3O15049 544 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 TGM5O43548 720 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 GALR2O43603 387 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-213ENST00000641272 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
PHGDH-213ENST00000641272 ECM1Q16610 540 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms