RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ZNF746Q6NUN9 644 aaPredicted RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 NIPA1Q7RTP0 329 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 HEATR3Q7Z4Q2 680 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 RALYLQ86SE5 291 aaKnown RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 ELSPBP1Q96BH3 223 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 MBOAT7Q96N66 472 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 TRMT61BQ9BVS5 477 aaKnown RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 VPS45Q9NRW7 570 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 FBXW11Q9UKB1 542 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 SMG1Q96Q15 3661 aaKnown RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 LOC400499M0QZD8 3231 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 K7ESF4 209 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 DHX15O43143 795 aaKnown RBP12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 RPP40O75818 363 aaKnown RBP12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 PAPSS2O95340 614 aaPredicted RBP12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 EFEMP2O95967 443 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 OATP04181 439 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 CHRNB1P11230 501 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 CEACAM1P13688 526 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 MPLP40238 635 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 GRM2Q14416 872 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 TANGO2Q6ICL3 276 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 FUT10Q6P4F1 479 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 C19orf48Q6RUI8 117 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 MRPL10Q7Z7H8 261 aaKnown RBP12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 PDZD3Q86UT5 571 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 PGBD1Q96JS3 809 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 MAP3K14Q99558 947 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 PCDHGA5Q9Y5G8 931 aa12.37□□□□□ -0.43
PTP4A1-207ENST00000639568 hCG_1642624A0A1W2PR95 340 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 ITGA4P13612 1032 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 CCNE1P24864 410 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 GAS6Q14393 721 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 PLA2G2CQ5R387 149 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 SLC7A14Q8TBB6 771 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 GPR62Q9BZJ7 368 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 ZFP14Q9HCL3 533 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 HCFC1R1Q9NWW0 138 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
PTP4A1-207ENST00000639568 LAMA1P25391 3075 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 ARL5CA6NH57 179 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 F8W810 466 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 TADA2AO75478 443 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 DDAH1O94760 285 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 SEC24BO95487 1268 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 GDI1P31150 447 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 HOXA6P31267 233 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 PRKCEQ02156 737 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 PTGDRQ13258 359 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 DRP2Q13474 957 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 KIAA1211LQ6NV74 962 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 PRSS55Q6UWB4 352 aaPredicted RBP12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 KBTBD6Q86V97 674 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 SRBD1Q8N5C6 995 aaKnown RBP12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 CNNM3Q8NE01 707 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 GAB3Q8WWW8 586 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 NLRP4Q96MN2 994 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 ZNF334Q9HCZ1 680 aaPredicted RBP12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 SUCLA2Q9P2R7 463 aaPredicted RBP12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 DNMT3BQ9UBC3 853 aaKnown RBP12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 ADAM28Q9UKQ2 775 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
PTP4A1-207ENST00000639568 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 HIP1O00291 1037 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 ABCB7O75027 752 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 POU2F2P09086 479 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 SREBF1P36956 1147 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 MLH1P40692 756 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 DSC1Q08554 894 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 UVSSAQ2YD98 709 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 AXDND1Q5T1B0 1012 aaPredicted RBP12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 TCEAL6Q6IPX3 200 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
PTP4A1-207ENST00000639568 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms