RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 ARID4BQ4LE39 1312 aaPredicted RBP4.36□□□□□ -1.71
VPS8-228ENST00000628962 UNC119BA6NIH7 251 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 MAFGO15525 162 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 OPHN1O60890 802 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 RBMXL2O75526 392 aaKnown RBP4.35□□□□□ -1.71
VPS8-228ENST00000628962 IGLV2-14P01704 120 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 PTX3P26022 381 aaPredicted RBP4.35□□□□□ -1.71
VPS8-228ENST00000628962 CTGFP29279 349 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 MPLP40238 635 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 RNASE9P60153 205 aaKnown RBP4.35□□□□□ -1.71
VPS8-228ENST00000628962 ADCY2Q08462 1091 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 SQSTM1Q13501 440 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 SYT12Q8IV01 421 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 C9orf106Q8NAJ2 232 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 CAGE1Q8TC20 777 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 ASB10Q8WXI3 467 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 SLC9A6Q92581 669 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 PCIF1Q9H4Z3 704 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 RNF7Q9UBF6 113 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 TLK1Q9UKI8 766 aa4.35□□□□□ -1.71
VPS8-228ENST00000628962 TNPO3Q9Y5L0 923 aaKnown RBP4.35□□□□□ -1.71
VPS8-228ENST00000628962 DNAJC9-AS1A6NH13 148 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 MARCH11A6NNE9 402 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 M0R2C6 588 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 PRPF6O94906 941 aaKnown RBP4.34□□□□□ -1.71
VPS8-228ENST00000628962 MATN4O95460 622 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 S100BP04271 92 aaPredicted RBP4.34□□□□□ -1.71
VPS8-228ENST00000628962 GZMKP49863 264 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 NHLH2Q02577 135 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 TP53BP2Q13625 1128 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 TCEA2Q15560 299 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 CCDC181Q5TID7 509 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 BTNL9Q6UXG8 535 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 UNQ6494/PRO21346Q6UXR6 183 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 XYLT1Q86Y38 959 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 KIAA1958Q8N8K9 716 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 CHST14Q8NCH0 376 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 NOL10Q9BSC4 688 aaKnown RBP4.34□□□□□ -1.71
VPS8-228ENST00000628962 CLCA2Q9UQC9 943 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 HDAC5Q9UQL6 1122 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 PTCH2Q9Y6C5 1203 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 ARHGEF11O15085 1522 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 SCRIBQ14160 1630 aa4.34□□□□□ -1.71
VPS8-228ENST00000628962 EIF5BO60841 1220 aaKnown RBP4.33□□□□□ -1.72
VPS8-228ENST00000628962 SPDEFO95238 335 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 ASMTLO95671 621 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 DDX6P26196 483 aaKnown RBP eCLIP4.33□□□□□ -1.72
VPS8-228ENST00000628962 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
VPS8-228ENST00000628962 AMPD3Q01432 767 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 ADCY1Q08828 1119 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 MPP3Q13368 585 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 PLEKHG6Q3KR16 790 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 PDCD4Q53EL6 469 aaKnown RBP4.33□□□□□ -1.72
VPS8-228ENST00000628962 HSP90AB2PQ58FF8 381 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 KIAA1841Q6NSI8 718 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 DRICH1Q6PGQ1 229 aaPredicted RBP4.33□□□□□ -1.72
VPS8-228ENST00000628962 C1QL2Q7Z5L3 287 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 SYNPOQ8N3V7 929 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 SMG7Q92540 1137 aaKnown RBP4.33□□□□□ -1.72
VPS8-228ENST00000628962 HIST1H2AHQ96KK5 128 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 HIST1H2AJQ99878 128 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 DDX56Q9NY93 547 aaKnown RBP4.33□□□□□ -1.72
VPS8-228ENST00000628962 PLAAQ9Y263 795 aa4.33□□□□□ -1.72
VPS8-228ENST00000628962 BAZ1AQ9NRL2 1556 aaPredicted RBP4.32□□□□□ -1.72
VPS8-228ENST00000628962 NCAPD3P42695 1498 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 MAST3O60307 1309 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 SALL3Q9BXA9 1300 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 PRR5-ARHGAP8B1AHC4 643 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 H7C1D1 291 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 C1QL1O75973 258 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 GLRX3O76003 335 aaKnown RBP4.32□□□□□ -1.72
VPS8-228ENST00000628962 PARNO95453 639 aaKnown RBP4.32□□□□□ -1.72
VPS8-228ENST00000628962 CNGA1P29973 690 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 MASP1P48740 699 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 CD69Q07108 199 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 MAPK7Q13164 816 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 ZNF174Q15697 407 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 ESRP1Q6NXG1 681 aaKnown RBP4.32□□□□□ -1.72
VPS8-228ENST00000628962 ZCCHC8Q6NZY4 707 aaKnown RBP4.32□□□□□ -1.72
VPS8-228ENST00000628962 PRPF38AQ8NAV1 312 aaKnown RBP4.32□□□□□ -1.72
VPS8-228ENST00000628962 ZSWIM2Q8NEG5 633 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 MYL10Q9BUA6 226 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 DUSP26Q9BV47 211 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 C1QTNF7Q9BXJ2 289 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 SEMA4GQ9NTN9 838 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 CD2APQ9Y5K6 639 aa4.32□□□□□ -1.72
VPS8-228ENST00000628962 PTPDC1A2A3K4 754 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 B4E1Z4 1266 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 LY86O95711 162 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 HLA-DOAP06340 250 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 SCAPQ12770 1279 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 METRNLQ641Q3 311 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 TIGD7Q6NT04 549 aaPredicted RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 TAS1R1Q7RTX1 841 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 DDX53Q86TM3 631 aaKnown RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 C7orf31Q8N865 590 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms