RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 NXF3Q9H4D5 531 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 NPHP3-ACAD11A0A0J9YXS1 232 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CARNS1A5YM72 827 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 VNN2O95498 520 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 ADSSP30520 456 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 GTF2F1P35269 517 aaKnown RBP eCLIP6.27□□□□□ -1.41
FMR1-217ENST00000620828 DNM2P50570 870 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 PTPN14Q15678 1187 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 SMAD2Q15796 467 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 FAM173BQ6P4H8 233 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 NOTUMQ6P988 496 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 MAP4K3Q8IVH8 894 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 ERMNQ8TAM6 284 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 ZMAT2Q96NC0 199 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 YME1L1Q96TA2 773 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 OLFML3Q9NRN5 406 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 F8W810 466 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 CTSAP10619 480 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CCT6AP40227 531 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 BMT2Q1RMZ1 405 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 NOMO2Q5JPE7 1267 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 POTEHQ6S545 545 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 ZPBP2Q6X784 338 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 TAS1R1Q7RTX1 841 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 MRPL43Q8N983 215 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 KHSRPQ92945 711 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■□□ 16.1
FMR1-217ENST00000620828 PPP1R16BQ96T49 567 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 MRPL9Q9BYD2 267 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 PRRC2BQ5JSZ5 2229 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 MYMKA6NI61 221 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 ACTN4O43707 911 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 CLCN4P51793 760 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 EFNA5P52803 228 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CHMP4BP1P59074 171 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 TFDP1Q14186 410 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 CABP7Q86V35 215 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 SYMPKQ92797 1274 aaKnown RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 ZNF668Q96K58 619 aaPredicted RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 CLIC6Q96NY7 704 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 GAS2L1Q99501 681 aaPredicted RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 CDT1Q9H211 546 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 UBE2ZQ9H832 354 aaPredicted RBP6.27□□□□□ -1.41
FMR1-217ENST00000620828 CERS4Q9HA82 394 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 KIF3AQ9Y496 699 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 MYO15AQ9UKN7 3530 aa6.27□□□□□ -1.41
FMR1-217ENST00000620828 HIDE1A8MVS5 230 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 USO1O60763 962 aaKnown RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 DSG1Q02413 1049 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 SOX4Q06945 474 aaPredicted RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 UPP1Q16831 310 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 TJAP1Q5JTD0 557 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 SPATA20Q8TB22 786 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 POF1BQ8WVV4 589 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 C7orf25Q9BPX7 421 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 KIFC3Q9BVG8 833 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 FNIP2Q9P278 1114 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 STK39Q9UEW8 545 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 A0A0B4J269 797 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 TBKBP1A7MCY6 615 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 PI4K2BG5E9Z4 385 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 N4BP3O15049 544 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 NCK2O43639 380 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 MCF2P10911 925 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 FGFR3P22607 806 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 WNT7BP56706 349 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 BTG3Q14201 252 aaPredicted RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 ZC3H3Q8IXZ2 948 aaKnown RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 C3orf58Q8NDZ4 430 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 CMASQ8NFW8 434 aaPredicted RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 FBXL18Q96ME1 805 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 THEGQ9P2T0 379 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 FANCMQ8IYD8 2048 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 TTC26A0AVF1 554 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 ANO9A1A5B4 782 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 DENND3A2RUS2 1198 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 LRPAP1P30533 357 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 KCNQ1P51787 676 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 CLDN10P78369 228 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 DCAF4L1Q3SXM0 396 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 ZNF720Q7Z2F6 126 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 BEST2Q8NFU1 509 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 HDAC7Q8WUI4 952 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 HVCN1Q96D96 273 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 BORCS6Q96GS4 357 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 NLRP4Q96MN2 994 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 RSAD1Q9HA92 442 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 UPF2Q9HAU5 1272 aaKnown RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 TLR9Q9NR96 1032 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 TCEAL9Q9UHQ7 104 aa6.26□□□□□ -1.41
FMR1-217ENST00000620828 CPSF3Q9UKF6 684 aaKnown RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 PIN4Q9Y237 131 aaKnown RBP6.26□□□□□ -1.41
FMR1-217ENST00000620828 MBTPS2O43462 519 aa6.25□□□□□ -1.41
FMR1-217ENST00000620828 SRGAP2CP0DJJ0 459 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms