RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 LLGL2Q6P1M3 1020 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 PPFIBP1Q86W92 1011 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 GSTCDQ8NEC7 633 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 SUSD6Q92537 303 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 S1PR5Q9H228 398 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 PDZD7Q9H5P4 517 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 PARP2Q9UGN5 583 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 SSX2IPQ9Y2D8 614 aa20.08■□□□□ 0.81
VCX3A-203ENST00000612369 TDRD15B5MCY1 1934 aaKnown RBP20.08■□□□□ 0.8
VCX3A-203ENST00000612369 C5orf42Q9H799 3197 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 K7ERI5 159 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 SOD2P04179 222 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 GUCY2CP25092 1073 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 PTPN14Q15678 1187 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 SYCE2Q6PIF2 218 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 C1orf186Q6ZWK4 172 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 APBB1IPQ7Z5R6 666 aaPredicted RBP20.07■□□□□ 0.8
VCX3A-203ENST00000612369 CDK5RAP3Q96JB5 506 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 RPS6KC1Q96S38 1066 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 COLEC11Q9BWP8 271 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 PHF7Q9BWX1 381 aaPredicted RBP20.07■□□□□ 0.8
VCX3A-203ENST00000612369 VN1R3Q9BXE9 311 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 EMILIN2Q9BXX0 1053 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 KCND2Q9NZV8 630 aa20.07■□□□□ 0.8
VCX3A-203ENST00000612369 RBM19Q9Y4C8 960 aaKnown RBP20.07■□□□□ 0.8
VCX3A-203ENST00000612369 GPR37L1O60883 481 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 HIP1RO75146 1068 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 PEX3P56589 373 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 ITIH3Q06033 890 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 DMP1Q13316 513 aaPredicted RBP20.06■□□□□ 0.8
VCX3A-203ENST00000612369 DCAF4L1Q3SXM0 396 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 TMEM31Q5JXX7 168 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 KCNK18Q7Z418 384 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 SYT2Q8N9I0 419 aaPredicted RBP20.06■□□□□ 0.8
VCX3A-203ENST00000612369 AUTS2Q8WXX7 1259 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 INTS4Q96HW7 963 aaKnown RBP20.06■□□□□ 0.8
VCX3A-203ENST00000612369 PNMA5Q96PV4 448 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 TMEM134Q9H6X4 195 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 POLD4Q9HCU8 107 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 MRPL17Q9NRX2 175 aaKnown RBP20.06■□□□□ 0.8
VCX3A-203ENST00000612369 DZANK1Q9NVP4 752 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 MARCH5Q9NX47 278 aa20.06■□□□□ 0.8
VCX3A-203ENST00000612369 PRG3Q9Y2Y8 225 aaPredicted RBP20.06■□□□□ 0.8
VCX3A-203ENST00000612369 TTLL13PA6NNM8 815 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 CCDC169A6NNP5 214 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 DCXO43602 365 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 LILRB3O75022 631 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 EFEMP2O95967 443 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 LIG1P18858 919 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 NPTX2P47972 431 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 CBX2Q14781 532 aaPredicted RBP20.05■□□□□ 0.8
VCX3A-203ENST00000612369 ZRSR1Q15695 479 aaKnown RBP20.05■□□□□ 0.8
VCX3A-203ENST00000612369 ATF7IP2Q5U623 682 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 CES5AQ6NT32 575 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 DAW1Q8N136 415 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 KIFC3Q9BVG8 833 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 RUSC1Q9BVN2 902 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 HERC2P3Q9BVR0 1158 aa20.05■□□□□ 0.8
VCX3A-203ENST00000612369 LOC730098B7Z3J9 87 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 EDN1P05305 212 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 URODP06132 367 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 MAPK7Q13164 816 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 NT5DC1Q5TFE4 455 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 CABP7Q86V35 215 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 GPR65Q8IYL9 337 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 RNF168Q8IYW5 571 aaPredicted RBP20.04■□□□□ 0.8
VCX3A-203ENST00000612369 SLC22A17Q8WUG5 538 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 CALML4Q96GE6 196 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 NECTIN4Q96NY8 510 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 KLHL5Q96PQ7 755 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 NTPCRQ9BSD7 190 aaKnown RBP20.04■□□□□ 0.8
VCX3A-203ENST00000612369 ADAM7Q9H2U9 754 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 KMT5AQ9NQR1 393 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 SNTG2Q9NY99 539 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 KLK14Q9P0G3 267 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 ARHGAP28Q9P2N2 729 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 TNFSF13BQ9Y275 285 aa20.04■□□□□ 0.8
VCX3A-203ENST00000612369 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
VCX3A-203ENST00000612369 LONP1P36776 959 aaKnown RBP20.03■□□□□ 0.8
VCX3A-203ENST00000612369 UBA7P41226 1012 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 SLC12A3P55017 1021 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 TUSC3Q13454 348 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 TMEM119Q4V9L6 283 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 EEF1DP3Q658K8 133 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 RNF135Q8IUD6 432 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 SPIRE2Q8WWL2 714 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 LRFN3Q9BTN0 628 aa20.03■□□□□ 0.8
VCX3A-203ENST00000612369 RECQL4O94761 1208 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 SSBP05455 408 aaKnown RBP eCLIP20.02■□□□□ 0.8
VCX3A-203ENST00000612369 THP07101 528 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 CNPP09543 421 aaKnown RBP20.02■□□□□ 0.8
VCX3A-203ENST00000612369 PLA2G4BP0C869 781 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 COL9A1P20849 921 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 KLRC2P26717 231 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 GLUD2P49448 558 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 SMTNP53814 917 aa20.02■□□□□ 0.8
VCX3A-203ENST00000612369 SF3A1Q15459 793 aaKnown RBP20.02■□□□□ 0.8
VCX3A-203ENST00000612369 HERC4Q5GLZ8 1057 aaPredicted RBP20.02■□□□□ 0.8
VCX3A-203ENST00000612369 ACO2Q99798 780 aaKnown RBP20.02■□□□□ 0.8
VCX3A-203ENST00000612369 MRPL4Q9BYD3 311 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms