RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 A0A1W2PQ27 194 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 A0A1W2PQ64 194 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 A0A1W2PQD8 194 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 GRM6O15303 877 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 DDHD2O94830 711 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 RB1P06400 928 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 PROZP22891 400 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 GTF2BQ00403 316 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 HERC4Q5GLZ8 1057 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-210ENST00000601444 ZNF720Q7Z2F6 126 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 CEP120Q8N960 986 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 KCNN1Q92952 543 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 HPS3Q969F9 1004 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 C7orf25Q9BPX7 421 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 PLVAPQ9BX97 442 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 HAPLN2Q9GZV7 340 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 CDT1Q9H211 546 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 IKZF4Q9H2S9 585 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 NRDE2Q9H7Z3 1164 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 CHMP5Q9NZZ3 219 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 PLAGL2Q9UPG8 496 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 GDAQ9Y2T3 454 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 NLRC5Q86WI3 1866 aa22.02■■□□□ 1.12
SSBP4-210ENST00000601444 H0YCG3 227 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 CSPG5O95196 566 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 ITGB1P05556 798 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 GAP43P17677 238 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 SCNN1GP51170 649 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 CASP5P51878 434 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 AMPD3Q01432 767 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 CUL4BQ13620 913 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 CCDC85BQ15834 202 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-210ENST00000601444 DCAF4L1Q3SXM0 396 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 ZNF568Q3ZCX4 644 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 KCNT2Q6UVM3 1135 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 MICALL1Q8N3F8 863 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 GSTCDQ8NEC7 633 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 URGCPQ8TCY9 931 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 PPM1EQ8WY54 764 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 TCHPQ9BT92 498 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 C11orf84Q9BUA3 381 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-210ENST00000601444 MRPL9Q9BYD2 267 aaKnown RBP22.01■■□□□ 1.11
SSBP4-210ENST00000601444 LRRC27Q9C0I9 530 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 GBP3Q9H0R5 595 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 MRPL44Q9H9J2 332 aaKnown RBP22.01■■□□□ 1.11
SSBP4-210ENST00000601444 UBN1Q9NPG3 1134 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 DNAJB4Q9UDY4 337 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 GIT1Q9Y2X7 761 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 PCDHB12Q9Y5F1 795 aa22.01■■□□□ 1.11
SSBP4-210ENST00000601444 RALGAPA2Q2PPJ7 1873 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 NT5C1B-RDH14C9J2C7 533 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 ZC3H11AO75152 810 aaKnown RBP eCLIP22■■□□□ 1.11
SSBP4-210ENST00000601444 RECQL4O94761 1208 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 SLFN14P0C7P3 912 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 HARSP12081 509 aaKnown RBP22■■□□□ 1.11
SSBP4-210ENST00000601444 LAG3P18627 525 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 POU3F3P20264 500 aaPredicted RBP22■■□□□ 1.11
SSBP4-210ENST00000601444 DNAJB1P25685 340 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 SYKP43405 635 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 BCAR1P56945 870 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 OSTNP61366 133 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 ASIC1P78348 528 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 RNASELQ05823 741 aaKnown RBP22■■□□□ 1.11
SSBP4-210ENST00000601444 KCNA1Q09470 495 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 COASYQ13057 564 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 MPZL3Q6UWV2 235 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 HACE1Q8IYU2 909 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 CEP57L1Q8IYX8 460 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 MAFAQ8NHW3 353 aaPredicted RBP22■■□□□ 1.11
SSBP4-210ENST00000601444 SPPL3Q8TCT6 385 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 MRPS27Q92552 414 aaKnown RBP22■■□□□ 1.11
SSBP4-210ENST00000601444 P2RX5Q93086 422 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 BICD1Q96G01 975 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 PAGE5Q96GU1 130 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 STRA6Q9BX79 667 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 ST6GALNAC4Q9H4F1 302 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 MAGEF1Q9HAY2 307 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 AAASQ9NRG9 546 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 ANKFY1Q9P2R3 1169 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 SEL1LQ9UBV2 794 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 REV3LO60673 3130 aa22■■□□□ 1.11
SSBP4-210ENST00000601444 INPPL1O15357 1258 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 TOM1L1O75674 476 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 PPP1R37O75864 691 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 MYBP10242 640 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 CAMK1Q14012 370 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 SEZ6Q53EL9 994 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 CNNM4Q6P4Q7 775 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 SLC39A4Q6P5W5 647 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 ZPBP2Q6X784 338 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 CCDC65Q8IXS2 484 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 GLIS3Q8NEA6 775 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 ZNF558Q96NG5 402 aa21.99■■□□□ 1.11
SSBP4-210ENST00000601444 PYM1Q9BRP8 204 aaKnown RBP21.99■■□□□ 1.11
SSBP4-210ENST00000601444 TISP43B9A030 160 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 ANKRD63C9JTQ0 380 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 GTPBP6O43824 516 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-210ENST00000601444 FGF18O76093 207 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 GCNT3O95395 438 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 MCF2P10911 925 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms