RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DEPTORQ8TB45 409 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
SDF2-208ENST00000589788 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 PLVAPQ9BX97 442 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 TMEM117Q9H0C3 514 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 LMCD1Q9NZU5 365 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 PCDHB2Q9Y5E7 798 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 MTCH2Q9Y6C9 303 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 CHD9Q3L8U1 2897 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 KIAA1671Q9BY89 1806 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 PRRC2BQ5JSZ5 2229 aaKnown RBP11.45□□□□□ -0.58
SDF2-208ENST00000589788 C5orf67F2Z3F1 127 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 TSPAN1O60635 241 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 HIP1RO75146 1068 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 ZSCAN22P10073 491 aaPredicted RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 LIG1P18858 919 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 TXLNAP40222 546 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 NAMPTP43490 491 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 GRIN1Q05586 938 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 STK38Q15208 465 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 TMEM119Q4V9L6 283 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 RINT1Q6NUQ1 792 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 GLB1LQ6UWU2 654 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 ZNF598Q86UK7 904 aaKnown RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 LRRC43Q8N309 656 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 SLC17A8Q8NDX2 589 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 HELQQ8TDG4 1101 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 BSNDQ8WZ55 320 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 CCDC51Q96ER9 411 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 CASD1Q96PB1 797 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 TIPINQ9BVW5 301 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 POLD4Q9HCU8 107 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 PRMT7Q9NVM4 692 aaPredicted RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 FBXO2Q9UK22 296 aaPredicted RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 PCDHB12Q9Y5F1 795 aa11.44□□□□□ -0.58
SDF2-208ENST00000589788 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
SDF2-208ENST00000589788 CCDC169A6NNP5 214 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 ZNF623O75123 536 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 F13A1P00488 732 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 LINC00271P0C7V0 271 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 PLA2G4BP0C869 781 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 ATF7P17544 494 aaPredicted RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 LAG3P18627 525 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 HOXA11P31270 313 aaPredicted RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 EFNA5P52803 228 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 SLC39A14Q15043 492 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 KARSQ15046 597 aaKnown RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 MAPK6Q16659 721 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 LONRF3Q496Y0 759 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 NAALADL2Q58DX5 795 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 CLLU1OSQ5K130 101 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 CDCA2Q69YH5 1023 aaPredicted RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 C1orf186Q6ZWK4 172 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 SYT2Q8N9I0 419 aaPredicted RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 CNNM3Q8NE01 707 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 RSPH1Q8WYR4 309 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 BAP1Q92560 729 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 LPPQ93052 612 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 P2RX5Q93086 422 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 MRPL38Q96DV4 380 aaKnown RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 CPB2Q96IY4 423 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 MRPL9Q9BYD2 267 aaKnown RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 RNF19AQ9NV58 838 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 TYW1Q9NV66 732 aaKnown RBP11.43□□□□□ -0.58
SDF2-208ENST00000589788 KCND2Q9NZV8 630 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 HCSTQ9UBK5 93 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 PCDHB9Q9Y5E1 797 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 MYH11P35749 1972 aa11.43□□□□□ -0.58
SDF2-208ENST00000589788 B4GALT5O43286 388 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 PRKCBP05771 671 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 ARF4P18085 180 aaPredicted RBP11.42□□□□□ -0.58
SDF2-208ENST00000589788 PLCG1P19174 1290 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 GUCY2CP25092 1073 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 NASPP49321 788 aaPredicted RBP11.42□□□□□ -0.58
SDF2-208ENST00000589788 PEX3P56589 373 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 RAD51AP2Q09MP3 1159 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 DMP1Q13316 513 aaPredicted RBP11.42□□□□□ -0.58
SDF2-208ENST00000589788 PRPF4BQ13523 1007 aaKnown RBP11.42□□□□□ -0.58
SDF2-208ENST00000589788 DHX8Q14562 1220 aaKnown RBP11.42□□□□□ -0.58
SDF2-208ENST00000589788 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 SPECC1Q5M775 1068 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 UBXN11Q5T124 520 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 SLC27A1Q6PCB7 646 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 THNSL1Q8IYQ7 743 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 PHTF2Q8N3S3 785 aa11.42□□□□□ -0.58
SDF2-208ENST00000589788 ZNF511Q8NB15 262 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms