RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 PDXDC2PQ6P474 469 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CNNM4Q6P4Q7 775 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 GIMAP8Q8ND71 665 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ZNF280CQ8ND82 737 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ZNF570Q96NI8 536 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 AIFM3Q96NN9 605 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ZNF317Q96PQ6 595 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 TMEM237Q96Q45 408 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 GAS2L1Q99501 681 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 TSG101Q99816 390 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ZBED2Q9BTP6 218 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 REPIN1Q9BWE0 567 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ROPN1BQ9BZX4 212 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ASCC2Q9H1I8 757 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ROPN1Q9HAT0 212 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ARHGEF3Q9NR81 526 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 IL1RAPL1Q9NZN1 696 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 WDR35Q9P2L0 1181 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 STOML1Q9UBI4 398 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 MTRF1LQ9UGC7 380 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CIDEBQ9UHD4 219 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 GMEB1Q9Y692 573 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CAPN6Q9Y6Q1 641 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CFAP47Q6ZTR5 3102 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 LOC285556D6RIA3 1793 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CDK5RAP2Q96SN8 1893 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 ATRXP46100 2492 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GPR75-ASB3A0A0A6YYF3 556 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 EME2A4GXA9 379 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 PI4K2BG5E9Z4 385 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RAD51CO43502 376 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GNA14O95837 355 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 FAM153BP0C7A2 387 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 UQCRFS1P1P0C7P4 283 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 CALB2P22676 271 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 PBX2P40425 430 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 MMP13P45452 471 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 EMP3P54852 163 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 DRG2P55039 364 aaKnown RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 NCALDP61601 193 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 MECOMQ03112 1051 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RNASELQ05823 741 aaKnown RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 PABPC4Q13310 644 aaKnown RBP eCLIP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 MTA1Q13330 715 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RASGRF1Q13972 1273 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 KPNB1Q14974 876 aaKnown RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 DBN1Q16643 649 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 QPCTQ16769 361 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GSTA3Q16772 222 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 FAM153CQ494X1 144 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GALNTL6Q49A17 601 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RNF43Q68DV7 783 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 TTI2Q6NXR4 508 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 MFSD6Q6ZSS7 791 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 FAM43BQ6ZT52 329 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 ZNF365Q70YC5 407 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 VPS36Q86VN1 386 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 ZNF687Q8N1G0 1237 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 STAG2Q8N3U4 1231 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 PPFIBP2Q8ND30 876 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 NEK9Q8TD19 979 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 SCFD2Q8WU76 684 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 MAIP1Q8WWC4 291 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 TRIB2Q92519 343 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 INPP5DQ92835 1189 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GFM2Q969S9 779 aaKnown RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RBM41Q96IZ5 413 aaKnown RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 MAML3Q96JK9 1138 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 CNOT6LQ96LI5 555 aaKnown RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 FGD4Q96M96 766 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 AK8Q96MA6 479 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 INPP4AQ96PE3 977 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GBP5Q96PP8 586 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 PRDM12Q9H4Q4 367 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 RNPEPL1Q9HAU8 725 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 KCNMB3Q9NPA1 279 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GJB4Q9NTQ9 266 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 CXXC1Q9P0U4 656 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 KLHL14Q9P2G3 628 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 FAM153AQ9UHL3 310 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GJD2Q9UKL4 321 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 LRCH1Q9Y2L9 728 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 ASB3Q9Y575 518 aa8.04□□□□□ -1.12
TVP23C-208ENST00000581273 KMT2BQ9UMN6 2715 aaPredicted RBP8.04□□□□□ -1.12
TVP23C-208ENST00000581273 GAKO14976 1311 aa8.03□□□□□ -1.12
TVP23C-208ENST00000581273 MAGEA13PA6NCF6 341 aa8.03□□□□□ -1.12
TVP23C-208ENST00000581273 RCCD1A6NED2 376 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms