RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	C2orf71	A6NGG8	1288 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	HIDE1	A8MVS5	230 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178		K7ERI5	159 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	PER2	O15055	1255 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	RECQL4	O94761	1208 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	HSP90AA1	P07900	732 aa	Known RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	SRGAP2B	P0DMP2	458 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	CTSA	P10619	480 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	PLS3	P13797	630 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	PLCG1	P19174	1290 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	DSC1	Q08554	894 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	RAD51AP2	Q09MP3	1159 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	GRIK3	Q13003	919 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	SMAD4	Q13485	552 aa	Known RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	KARS	Q15046	597 aa	Known RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	CLUL1	Q15846	466 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	ATF7IP2	Q5U623	682 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	EEF1DP3	Q658K8	133 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	COLGALT2	Q8IYK4	626 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	VPS52	Q8N1B4	723 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	LRRC15	Q8TF66	581 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	SPIRE2	Q8WWL2	714 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	MSLNL	Q96KJ4	702 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	USP28	Q96RU2	1077 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	CCSER1	Q9C0I3	900 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	TMEM134	Q9H6X4	195 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	BLOC1S4	Q9NUP1	217 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	MARCH5	Q9NX47	278 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	CLEC1B	Q9P126	229 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	PARP2	Q9UGN5	583 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	CD207	Q9UJ71	328 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	FBXO2	Q9UK22	296 aa	Predicted RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	USP20	Q9Y2K6	914 aa		12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	RBM19	Q9Y4C8	960 aa	Known RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.03	□□□□□ -0.48
PPP4R1-208	ENST00000578178	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	NRP1	O14786	923 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SLC16A4	O15374	487 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MBTPS2	O43462	519 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	NR1I2	O75469	434 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ALDH2	P05091	517 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MARCKS	P29966	332 aa	Predicted RBP	12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CA8	P35219	290 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	OR1G1	P47890	313 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	COASY	Q13057	564 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	GIT2	Q14161	759 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ZNF568	Q3ZCX4	644 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	NT5DC1	Q5TFE4	455 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TAS1R3	Q7RTX0	852 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	GPBP1	Q86WP2	473 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	FAM178B	Q8IXR5	827 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MRPL43	Q8N983	215 aa	Known RBP	12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SMRP1	Q8NCR6	262 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	GSTCD	Q8NEC7	633 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	VN1R2	Q8NFZ6	395 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	LARP4B	Q92615	738 aa	Known RBP	12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	RAD54L	Q92698	747 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	VN1R3	Q9BXE9	311 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MRPL4	Q9BYD3	311 aa	Known RBP	12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MIOS	Q9NXC5	875 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SNTG2	Q9NY99	539 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	KLK14	Q9P0G3	267 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	KCNG1	Q9UIX4	513 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ODF2L	Q9ULJ1	636 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TNFSF13B	Q9Y275	285 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	FAN1	Q9Y2M0	1017 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SRPRB	Q9Y5M8	271 aa	Known RBP	12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	IRAK3	Q9Y616	596 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	BDP1	A6H8Y1	2624 aa		12.02	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CIT	O14578	2027 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	NPHP3-ACAD11	A0A0J9YXS1	232 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SFI1	A8K8P3	1242 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PDIA4	P13667	645 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TXLNA	P40222	546 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	NASP	P49321	788 aa	Predicted RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SMTN	P53814	917 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	RBM10	P98175	930 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CACNB1	Q02641	598 aa	Predicted RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CEBPZ	Q03701	1054 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	KCNC3	Q14003	757 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PTPN14	Q15678	1187 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SMAD2	Q15796	467 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ARSH	Q5FYA8	562 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SPECC1	Q5M775	1068 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TMEM184A	Q6ZMB5	413 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ACO2	Q99798	780 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	REEP2	Q9BRK0	252 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	NTPCR	Q9BSD7	190 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	HERC2P3	Q9BVR0	1158 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CDT1	Q9H211	546 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	LARS	Q9P2J5	1176 aa	Known RBP	12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PRKAG3	Q9UGI9	489 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TRIP11	Q15643	1979 aa		12.01	□□□□□ -0.49
PPP4R1-208	ENST00000578178		H0YCG3	227 aa		12	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PTGES	O14684	152 aa		12	□□□□□ -0.49
PPP4R1-208	ENST00000578178	FAM13A	O94988	1023 aa		12	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CXCL14	O95715	111 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms