RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 NDUFV1P49821 464 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 ADAM15Q13444 863 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 FOXD4L6Q3SYB3 417 aaPredicted RBP20.57■□□□□ 0.88
PKD1-223ENST00000561668 PLPP4Q5VZY2 271 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 FOXD4L3Q6VB84 417 aaPredicted RBP20.57■□□□□ 0.88
PKD1-223ENST00000561668 ZNF280BQ86YH2 543 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 LARP4BQ92615 738 aaKnown RBP20.57■□□□□ 0.88
PKD1-223ENST00000561668 CDCA3Q99618 268 aaPredicted RBP20.57■□□□□ 0.88
PKD1-223ENST00000561668 TMEM175Q9BSA9 504 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 KIFC3Q9BVG8 833 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 STK39Q9UEW8 545 aa20.57■□□□□ 0.88
PKD1-223ENST00000561668 PLXNA4Q9HCM2 1894 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 A0A087X0B3 334 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 SFI1A8K8P3 1242 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 AKAP5P24588 427 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 ANP32AP39687 249 aaKnown RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 MLH1P40692 756 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 DHX8Q14562 1220 aaKnown RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 SMC1AQ14683 1233 aaKnown RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 CTC1Q2NKJ3 1217 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 PTCRAQ6ISU1 281 aaPredicted RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 CCDC73Q6ZRK6 1079 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 ADGRD2Q7Z7M1 963 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 EFHBQ8N7U6 833 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 IGSF21Q96ID5 467 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 RPS6KC1Q96S38 1066 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 SCAND2PQ9GZW5 306 aaPredicted RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 CCDC113Q9H0I3 377 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 NXF3Q9H4D5 531 aaKnown RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 TMEM134Q9H6X4 195 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 LARSQ9P2J5 1176 aaKnown RBP20.56■□□□□ 0.88
PKD1-223ENST00000561668 DNAJB4Q9UDY4 337 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 ODF2LQ9ULJ1 636 aa20.56■□□□□ 0.88
PKD1-223ENST00000561668 TCHHQ07283 1943 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 FSCN2O14926 492 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 PER2O15055 1255 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 DDHD2O94830 711 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 CXCL14O95715 111 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 KRT18P05783 430 aaKnown RBP20.55■□□□□ 0.88
PKD1-223ENST00000561668 SRGAP2BP0DMP2 458 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 GTF2F1P35269 517 aaKnown RBP eCLIP20.55■□□□□ 0.88
PKD1-223ENST00000561668 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
PKD1-223ENST00000561668 ZNF131P52739 623 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 STRN3Q13033 797 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 COL19A1Q14993 1142 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 E2F4Q16254 413 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 ATF7IP2Q5U623 682 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 RRAGBQ5VZM2 374 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 RESP18Q5W5W9 173 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 ADALQ6DHV7 355 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 DDX53Q86TM3 631 aaKnown RBP20.55■□□□□ 0.88
PKD1-223ENST00000561668 VPS52Q8N1B4 723 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.55■□□□□ 0.88
PKD1-223ENST00000561668 PDZD7Q9H5P4 517 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 PCDHGC5Q9Y5F6 944 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 REV3LO60673 3130 aa20.55■□□□□ 0.88
PKD1-223ENST00000561668 FAM237AA0A1B0GTK4 181 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 H0YCG3 227 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 PLS3P13797 630 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 OR1G1P47890 313 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 SLC11A1P49279 550 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 GIT2Q14161 759 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 MCM6Q14566 821 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 DCAF4L1Q3SXM0 396 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 MRPL43Q8N983 215 aaKnown RBP20.54■□□□□ 0.88
PKD1-223ENST00000561668 SPIRE2Q8WWL2 714 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 CHAMP1Q96JM3 812 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 ZFP42Q96MM3 310 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 TCHPQ9BT92 498 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 MRPL4Q9BYD3 311 aaKnown RBP20.54■□□□□ 0.88
PKD1-223ENST00000561668 KLK14Q9P0G3 267 aa20.54■□□□□ 0.88
PKD1-223ENST00000561668 TTLL13PA6NNM8 815 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 TNFRSF10AO00220 468 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 NRP1O14786 923 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 INPPL1O15357 1258 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 SLC16A4O15374 487 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 LINC01565O15544 149 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 LTBRP36941 435 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 ME1P48163 572 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 SCNN1GP51170 649 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 DUSP6Q16828 381 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 GPBP1Q86WP2 473 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 SPATA32Q96LK8 384 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 COLEC11Q9BWP8 271 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 CUEDC2Q9H467 287 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 MIOSQ9NXC5 875 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 SNTG2Q9NY99 539 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 ARHGAP28Q9P2N2 729 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 TNFSF13BQ9Y275 285 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 USP20Q9Y2K6 914 aa20.53■□□□□ 0.88
PKD1-223ENST00000561668 MYO7AQ13402 2215 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 GRXCR2A6NFK2 248 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 CMA1P23946 247 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 CLUL1Q15846 466 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 NT5DC1Q5TFE4 455 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 COLGALT2Q8IYK4 626 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 ZHX3Q9H4I2 956 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 CD207Q9UJ71 328 aa20.52■□□□□ 0.88
PKD1-223ENST00000561668 TCF20Q9UGU0 1960 aaKnown RBP20.52■□□□□ 0.87
PKD1-223ENST00000561668 ZMYM2Q9UBW7 1377 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms