RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SLC13A1Q9BZW2 595 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 BCO1Q9HAY6 547 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 HDAC5Q9UQL6 1122 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 PCDHGA9Q9Y5G4 932 aaKnown RBP6.33□□□□□ -1.4
USP8-218ENST00000561330 PCDHGA8Q9Y5G5 932 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 PCDHGA7Q9Y5G6 932 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 PCDHGA6Q9Y5G7 932 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 PCDHGA3Q9Y5H0 932 aa6.33□□□□□ -1.4
USP8-218ENST00000561330 FAM171A2A8MVW0 826 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 C1QTNF3-AMACRE9PGA6 284 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 FZD9O00144 591 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 NDUFS2O75306 463 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 MGAT2Q10469 447 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 EFCAB2Q5VUJ9 269 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 Q6ZVL8 140 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 MB21D1Q8N884 522 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 OR7D4Q8NG98 312 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
USP8-218ENST00000561330 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
USP8-218ENST00000561330 CPPED1Q9BRF8 314 aaPredicted RBP6.32□□□□□ -1.4
USP8-218ENST00000561330 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
USP8-218ENST00000561330 SAP30BPQ9UHR5 308 aaKnown RBP6.32□□□□□ -1.4
USP8-218ENST00000561330 ADCY6O43306 1168 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 ENDOD1O94919 500 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 HSP90B1P14625 803 aaKnown RBP6.31□□□□□ -1.4
USP8-218ENST00000561330 C5AR1P21730 350 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 ACRV1P26436 265 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 PTPN7P35236 360 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 SLC16A1P53985 500 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 CRHR2Q13324 411 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 SPDYAQ5MJ70 313 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 PRAMEF14Q5SWL7 426 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 FAM83AQ86UY5 434 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 PQLC1Q8N2U9 271 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 SH3RF3Q8TEJ3 882 aaPredicted RBP6.31□□□□□ -1.4
USP8-218ENST00000561330 NRG4Q8WWG1 115 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
USP8-218ENST00000561330 TEKT5Q96M29 485 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 CEP89Q96ST8 783 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 PDCD2LQ9BRP1 358 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 ZMYM3Q14202 1370 aa6.31□□□□□ -1.4
USP8-218ENST00000561330 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 SNUPNO95149 360 aaKnown RBP6.3□□□□□ -1.4
USP8-218ENST00000561330 PDGFRBP09619 1106 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 SREBF1P36956 1147 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 MAN2A2P49641 1150 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 CNGB1Q14028 1251 aaPredicted RBP6.3□□□□□ -1.4
USP8-218ENST00000561330 NRN1LQ496H8 165 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 HOXB13Q92826 284 aaPredicted RBP6.3□□□□□ -1.4
USP8-218ENST00000561330 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 GPR87Q9BY21 358 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 AURKAIP1Q9NWT8 199 aaPredicted RBP6.3□□□□□ -1.4
USP8-218ENST00000561330 TUBD1Q9UJT1 453 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
USP8-218ENST00000561330 GOLGA6L6A8MZA4 724 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 PRR5-ARHGAP8B1AHC4 643 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 B5MCH6 92 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 HK1P19367 917 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 WASP42768 502 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 RECQLP46063 649 aaPredicted RBP6.29□□□□□ -1.4
USP8-218ENST00000561330 SCNN1GP51170 649 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 RRP1BQ14684 758 aaKnown RBP6.29□□□□□ -1.4
USP8-218ENST00000561330 SEPT2Q15019 361 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 USP39Q53GS9 565 aaKnown RBP6.29□□□□□ -1.4
USP8-218ENST00000561330 Q6ZRM9 215 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 DOK3Q7L591 496 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 ZBTB46Q86UZ6 589 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 TRMT2AQ8IZ69 625 aaKnown RBP6.29□□□□□ -1.4
USP8-218ENST00000561330 REPS2Q8NFH8 660 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP8-218ENST00000561330 STAG1Q8WVM7 1258 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 DPF2Q92785 391 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 CEP95Q96GE4 821 aa6.29□□□□□ -1.4
USP8-218ENST00000561330 SENP6Q9GZR1 1112 aaPredicted RBP6.29□□□□□ -1.4
USP8-218ENST00000561330 INSRRP14616 1297 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 FLT3LGP49771 235 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 NEK2P51955 445 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 RABGGTBP53611 331 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 KIF23Q02241 960 aaPredicted RBP6.28□□□□□ -1.4
USP8-218ENST00000561330 ODF1Q14990 250 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 DCAF17Q5H9S7 520 aaPredicted RBP6.28□□□□□ -1.4
USP8-218ENST00000561330 FAM47AQ5JRC9 791 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 METTL24Q5JXM2 366 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 MFSD14BQ5SR56 506 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
USP8-218ENST00000561330 XYLT1Q86Y38 959 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 FBXO18Q8NFZ0 1043 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 OR2I1PQ8NGU4 316 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 EXTL1Q92935 676 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 MNTQ99583 582 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 LSM14BQ9BX40 385 aaKnown RBP6.28□□□□□ -1.4
USP8-218ENST00000561330 LDAHQ9H6V9 325 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 MANSC1Q9H8J5 431 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 LANCL2Q9NS86 450 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
USP8-218ENST00000561330 MYRFQ9Y2G1 1151 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms