RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 THNSL1Q8IYQ7 743 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 ABI1Q8IZP0 508 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 CNNM3Q8NE01 707 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 MCPH1Q8NEM0 835 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 UBE2Q2Q8WVN8 375 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 KCNN1Q92952 543 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 LPPQ93052 612 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 IGSF21Q96ID5 467 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 PRIMPOLQ96LW4 560 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 POP1Q99575 1024 aaKnown RBP7.63□□□□□ -1.19
SPG11-224ENST00000561268 TMEM175Q9BSA9 504 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 S1PR5Q9H228 398 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 EPHX3Q9H6B9 360 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 RSAD1Q9HA92 442 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.63□□□□□ -1.19
SPG11-224ENST00000561268 MARCH5Q9NX47 278 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 SPG21Q9NZD8 308 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 BARX2Q9UMQ3 279 aaPredicted RBP7.63□□□□□ -1.19
SPG11-224ENST00000561268 PCDHB2Q9Y5E7 798 aa7.63□□□□□ -1.19
SPG11-224ENST00000561268 C2orf71A6NGG8 1288 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 HIDE1A8MVS5 230 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 LAD1O00515 517 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 USO1O60763 962 aaKnown RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 PRPF40AO75400 957 aaKnown RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 EDN1P05305 212 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 GALTP07902 379 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 ZSCAN22P10073 491 aaPredicted RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 CTSAP10619 480 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 ARF4P18085 180 aaPredicted RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 TXKP42681 527 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 NDUFV1P49821 464 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 RBM10P98175 930 aaKnown RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 GUCY1B3Q02153 619 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 TFDP1Q14186 410 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 SMC1AQ14683 1233 aaKnown RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 ECM1Q16610 540 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 HERC4Q5GLZ8 1057 aaPredicted RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 HYIQ5T013 277 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 CCDC183Q5T5S1 534 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 PLPP4Q5VZY2 271 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 HAUS3Q68CZ6 603 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 NOTUMQ6P988 496 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 SYCE2Q6PIF2 218 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 ADGRD1Q6QNK2 874 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 DDX53Q86TM3 631 aaKnown RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 GPR65Q8IYL9 337 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 GSTCDQ8NEC7 633 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 PIGOQ8TEQ8 1089 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 BSNDQ8WZ55 320 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 PGBD4Q96DM1 585 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 TCF25Q9BQ70 676 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 LRFN3Q9BTN0 628 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 EIF2AQ9BY44 585 aaKnown RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 RHOBTB2Q9BYZ6 727 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 CSRNP2Q9H175 543 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 POLR3FQ9H1D9 316 aaPredicted RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 FZD8Q9H461 694 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 TSPY26PQ9H489 355 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 DNAJB4Q9UDY4 337 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 STK39Q9UEW8 545 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 USP15Q9Y4E8 981 aaPredicted RBP7.62□□□□□ -1.19
SPG11-224ENST00000561268 IPPQ9Y573 584 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 HCFC2Q9Y5Z7 792 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 CACNA1HO95180 2353 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 GREB1Q4ZG55 1949 aa7.62□□□□□ -1.19
SPG11-224ENST00000561268 A0A1B0GUA9 196 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 C2orf72A6NCS6 295 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 PRR33A8MZF0 331 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 DCXO43602 365 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 STX6O43752 255 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 LILRB3O75022 631 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 ZC3H11AO75152 810 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPG11-224ENST00000561268 DDHD2O94830 711 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 ERLIN2O94905 339 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 HOXB8P17481 243 aaPredicted RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 CYP11B2P19099 503 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 NAMPTP43490 491 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 SLC11A1P49279 550 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 AFF1P51825 1210 aaKnown RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 FOSBP53539 338 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 ATP2C1P98194 919 aaPredicted RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 MAPK7Q13164 816 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 GIT2Q14161 759 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 PTPN14Q15678 1187 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 NAB2Q15742 525 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 SPOUT1Q5T280 376 aaKnown RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 ATL3Q6DD88 541 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 ANKRD54Q6NXT1 300 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 COLGALT2Q8IYK4 626 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 KCTD17Q8N5Z5 321 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 MRPL43Q8N983 215 aaKnown RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 TMEM169Q96HH4 297 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 NACC1Q96RE7 527 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 MMTAG2Q9BU76 263 aaKnown RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 HERC2P3Q9BVR0 1158 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 PHF7Q9BWX1 381 aaPredicted RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 PDCL3Q9H2J4 239 aa7.61□□□□□ -1.19
SPG11-224ENST00000561268 NXF3Q9H4D5 531 aaKnown RBP7.61□□□□□ -1.19
SPG11-224ENST00000561268 TLE6Q9H808 572 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms