RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 HAPLN2Q9GZV7 340 aa23.73■■□□□ 1.39
SNX1-206ENST00000559389 MAN1B1Q9UKM7 699 aa23.73■■□□□ 1.39
SNX1-206ENST00000559389 STYXL1Q9Y6J8 313 aa23.73■■□□□ 1.39
SNX1-206ENST00000559389 ANKRD63C9JTQ0 380 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 CLDN3O15551 220 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 HOXA2O43364 376 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 RABGGTBP53611 331 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 SMAD3P84022 425 aaKnown RBP23.72■■□□□ 1.39
SNX1-206ENST00000559389 AGMOQ6ZNB7 445 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 ZBTB33Q86T24 672 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 NELFCDQ8IXH7 590 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 HACE1Q8IYU2 909 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 SYCP3Q8IZU3 236 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 CEP120Q8N960 986 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 TCHPQ9BT92 498 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 ZBED2Q9BTP6 218 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 PCDHA11Q9Y5I1 949 aa23.72■■□□□ 1.39
SNX1-206ENST00000559389 FNDC1Q4ZHG4 1894 aaPredicted RBP23.72■■□□□ 1.39
SNX1-206ENST00000559389 A0A0B4J269 797 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 TLL1O43897 1013 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 HARSP12081 509 aaKnown RBP23.71■■□□□ 1.39
SNX1-206ENST00000559389 ITGA4P13612 1032 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 GRM5P41594 1212 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 GATMP50440 423 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 CLLU1OSQ5K130 101 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 ZNF658Q5TYW1 1059 aaPredicted RBP23.71■■□□□ 1.39
SNX1-206ENST00000559389 SLFN12LQ6IEE8 588 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 SP7Q8TDD2 431 aaPredicted RBP23.71■■□□□ 1.39
SNX1-206ENST00000559389 ZNF689Q96CS4 500 aaPredicted RBP23.71■■□□□ 1.39
SNX1-206ENST00000559389 YME1L1Q96TA2 773 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 PBX4Q9BYU1 374 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 GTPBP4Q9BZE4 634 aaKnown RBP23.71■■□□□ 1.39
SNX1-206ENST00000559389 GBP3Q9H0R5 595 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 KIAA1468Q9P260 1216 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 INSL6Q9Y581 213 aa23.71■■□□□ 1.39
SNX1-206ENST00000559389 PTMSP20962 102 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 PBX2P40425 430 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 MATR3P43243 847 aaKnown RBP eCLIP23.7■■□□□ 1.38
SNX1-206ENST00000559389 KNOP1Q1ED39 458 aaKnown RBP23.7■■□□□ 1.38
SNX1-206ENST00000559389 COBLL1Q53SF7 1204 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 CMTR2Q8IYT2 770 aaKnown RBP23.7■■□□□ 1.38
SNX1-206ENST00000559389 GUF1Q8N442 669 aaKnown RBP23.7■■□□□ 1.38
SNX1-206ENST00000559389 RAD9AQ99638 391 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 APOL6Q9BWW8 343 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 TMEM117Q9H0C3 514 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 RNF39Q9H2S5 420 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 RSAD1Q9HA92 442 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 RALGAPA2Q2PPJ7 1873 aa23.7■■□□□ 1.38
SNX1-206ENST00000559389 TGFB1I1O43294 461 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 FAM189A1O60320 539 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 RECQL4O94761 1208 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 KIF20AO95235 890 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 ADSSP30520 456 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 MORC3Q14149 939 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 RAB30Q15771 203 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 GLB1LQ6UWU2 654 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 SMYD4Q8IYR2 804 aaPredicted RBP23.69■■□□□ 1.38
SNX1-206ENST00000559389 TRIML1Q8N9V2 468 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 RSPH1Q8WYR4 309 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 UBN1Q9NPG3 1134 aa23.69■■□□□ 1.38
SNX1-206ENST00000559389 YBX2Q9Y2T7 364 aaKnown RBP23.69■■□□□ 1.38
SNX1-206ENST00000559389 LCHNA4D1U4 455 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 OGTO15294 1046 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 INPPL1O15357 1258 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 MYOGP15173 224 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 GARTP22102 1010 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 AKAP5P24588 427 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 MLH1P40692 756 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 THNSL1Q8IYQ7 743 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 ABI1Q8IZP0 508 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 HELQQ8TDG4 1101 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 POMGNT1Q8WZA1 660 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 CASD1Q96PB1 797 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 CBWD1Q9BRT8 395 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 MSTO1Q9BUK6 570 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 CCDC94Q9BW85 323 aaPredicted RBP23.68■■□□□ 1.38
SNX1-206ENST00000559389 KCTD10Q9H3F6 313 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 AGPAT3Q9NRZ7 376 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 SNTG2Q9NY99 539 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 GIT1Q9Y2X7 761 aa23.68■■□□□ 1.38
SNX1-206ENST00000559389 BIN1O00499 593 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 OFD1O75665 1012 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 BMP6P22004 513 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 DNAJB2P25686 324 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 SNRPFP62306 86 aaKnown RBP23.67■■□□□ 1.38
SNX1-206ENST00000559389 ARMCX5Q6P1M9 558 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 HS2ST1Q7LGA3 356 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 TMEM192Q8IY95 271 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 TYW1Q9NV66 732 aaKnown RBP23.67■■□□□ 1.38
SNX1-206ENST00000559389 MSRAQ9UJ68 235 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 MAPK8IP1Q9UQF2 711 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 KIAA1671Q9BY89 1806 aa23.67■■□□□ 1.38
SNX1-206ENST00000559389 TBKBP1A7MCY6 615 aa23.66■■□□□ 1.38
SNX1-206ENST00000559389 CA3P07451 260 aa23.66■■□□□ 1.38
SNX1-206ENST00000559389 KYAT1Q16773 422 aa23.66■■□□□ 1.38
SNX1-206ENST00000559389 PAN2Q504Q3 1202 aaKnown RBP23.66■■□□□ 1.38
SNX1-206ENST00000559389 SEZ6Q53EL9 994 aa23.66■■□□□ 1.38
SNX1-206ENST00000559389 ZBTB41Q5SVQ8 909 aa23.66■■□□□ 1.38
SNX1-206ENST00000559389 CCDC183Q5T5S1 534 aa23.66■■□□□ 1.38
SNX1-206ENST00000559389 ISM2Q6H9L7 571 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms