RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 FAM43AQ8N2R8 423 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 PRR18Q8N4B5 295 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 SLC16A11Q8NCK7 471 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 GPR156Q8NFN8 814 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 PPP1R14CQ8TAE6 165 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 DVL3Q92997 716 aaPredicted RBP5.6□□□□□ -1.51
CASC4-206ENST00000558847 LPPQ93052 612 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 C7orf25Q9BPX7 421 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 PRDM12Q9H4Q4 367 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 MYH16Q9H6N6 1097 aa5.6□□□□□ -1.51
CASC4-206ENST00000558847 RPTORQ8N122 1335 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 CCDC154A6NI56 674 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 HTRA2O43464 458 aaPredicted RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 SGTAO43765 313 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 IFIT2P09913 472 aaKnown RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 LTA4HP09960 611 aaKnown RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 ADCY8P40145 1251 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 CCT2P78371 535 aaKnown RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 MGAT5Q09328 741 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 GRM3Q14832 879 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 EIF4HQ15056 248 aaKnown RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 SAFBQ15424 915 aaKnown RBP eCLIP5.59□□□□□ -1.51
CASC4-206ENST00000558847 LONRF3Q496Y0 759 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 GAREM2Q75VX8 874 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 GPR155Q7Z3F1 870 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 TTC7BQ86TV6 843 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 NRG4Q8WWG1 115 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 RPS6KC1Q96S38 1066 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 C1QTNF3Q9BXJ4 246 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 TMEM60Q9H2L4 133 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 MANSC1Q9H8J5 431 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 BARX1Q9HBU1 254 aaPredicted RBP5.59□□□□□ -1.51
CASC4-206ENST00000558847 JADE2Q9NQC1 790 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 DDX21Q9NR30 783 aaKnown RBP eCLIP5.59□□□□□ -1.51
CASC4-206ENST00000558847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.59□□□□□ -1.51
CASC4-206ENST00000558847 USP25Q9UHP3 1055 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 SCOCQ9UIL1 159 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 PTPN22Q9Y2R2 807 aa5.59□□□□□ -1.51
CASC4-206ENST00000558847 C1QTNF3-AMACRE9PGA6 284 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 LAMTOR5O43504 91 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 ARIH2O95376 493 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 ZBED1O96006 694 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 HMGCRP04035 888 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 ZNF888P0CJ79 500 aaPredicted RBP5.58□□□□□ -1.52
CASC4-206ENST00000558847 GSPT1P15170 499 aaKnown RBP5.58□□□□□ -1.52
CASC4-206ENST00000558847 MEOX1P50221 254 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 CACNB3P54284 484 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 WNT3AP56704 352 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 FAM193AP78312 1265 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 ZNF267Q14586 743 aaPredicted RBP5.58□□□□□ -1.52
CASC4-206ENST00000558847 SURF1Q15526 300 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 C19orf54Q5BKX5 351 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 PLEKHH3Q7Z736 793 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 RALYLQ86SE5 291 aaKnown RBP5.58□□□□□ -1.52
CASC4-206ENST00000558847 KBTBD2Q8IY47 623 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 BCL6BQ8N143 479 aaPredicted RBP5.58□□□□□ -1.52
CASC4-206ENST00000558847 ZBTB34Q8NCN2 500 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 CYFIP2Q96F07 1278 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 ACO2Q99798 780 aaKnown RBP5.58□□□□□ -1.52
CASC4-206ENST00000558847 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 SERPINB13Q9UIV8 391 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 INTUQ9ULD6 942 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 POLHQ9Y253 713 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 IPPQ9Y573 584 aa5.58□□□□□ -1.52
CASC4-206ENST00000558847 A0A1W2PR48 441 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 NPEPPSL1A6NEC2 478 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 SUV39H1O43463 412 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 TUSC2O75896 110 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 C6P13671 934 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 RHCEP18577 417 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 ECHS1P30084 290 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 GDF5P43026 501 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 RHDQ02161 417 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 VPS72Q15906 364 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 COBLL1Q53SF7 1204 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 SPRED1Q7Z699 444 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 RTKN2Q8IZC4 609 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 PMM1Q92871 262 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 TIFAQ96CG3 184 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 MTFMTQ96DP5 389 aaKnown RBP5.57□□□□□ -1.52
CASC4-206ENST00000558847 CDK5RAP3Q96JB5 506 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 FAM167AQ96KS9 214 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 UIMC1Q96RL1 719 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 FDXACB1Q9BRP7 624 aaPredicted RBP5.57□□□□□ -1.52
CASC4-206ENST00000558847 CHMP4AQ9BY43 222 aa5.57□□□□□ -1.52
CASC4-206ENST00000558847 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.57□□□□□ -1.52
CASC4-206ENST00000558847 A0A0A6YYK5 440 aaPredicted RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 CNOT4O95628 575 aaKnown RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 LY86O95711 162 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 GASTP01350 101 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 EPHB4P54760 987 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 USP10Q14694 798 aaKnown RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 NOMO1Q15155 1222 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 SYCP2LQ5T4T6 812 aa5.56□□□□□ -1.52
CASC4-206ENST00000558847 DARS2Q6PI48 645 aaKnown RBP5.56□□□□□ -1.52
CASC4-206ENST00000558847 LARP4Q71RC2 724 aaKnown RBP eCLIP5.56□□□□□ -1.525e-6■■■■■ 32.5
CASC4-206ENST00000558847 DAAM2Q86T65 1068 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms