RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DOCK6Q96HP0 2047 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 hCG_1984214I3L0E3 225 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 M0R2N6 131 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 B4GALT5O43286 388 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 LRRN2O75325 713 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 MAFO75444 373 aaPredicted RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 RPLP2P05387 115 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 FBXO45P0C2W1 286 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 IFNAR1P17181 557 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 NPR3P17342 541 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 AKAP5P24588 427 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 KLRC2P26717 231 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 GNA11P29992 359 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 HOXA11P31270 313 aaPredicted RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 AK2P54819 239 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 SSRP1Q08945 709 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 CWF19L1Q69YN2 538 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 NCAPH2Q6IBW4 605 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 CES5AQ6NT32 575 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 B3GNT9Q6UX72 402 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 MAEAQ7L5Y9 396 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 CABP7Q86V35 215 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 BLIDQ8IZY5 108 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM130Q8N3G9 435 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 ZNF713Q8N859 430 aaPredicted RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 NECAB1Q8N987 351 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 SMG8Q8ND04 991 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 HASPINQ8TF76 798 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 RIN2Q8WYP3 895 aaPredicted RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 BAP1Q92560 729 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 HAS1Q92839 578 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 CASP10Q92851 521 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 DYDC2Q96IM9 177 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 FAM167AQ96KS9 214 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 KLHL5Q96PQ7 755 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 CDCA3Q99618 268 aaPredicted RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 NIFKQ9BYG3 293 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 DDX25Q9UHL0 483 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 VAV3Q9UKW4 847 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 CEP131Q9UPN4 1083 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 GPR179Q6PRD1 2367 aa7.66□□□□□ -1.18
PRPF40B-214ENST00000551320 IGKV6-21A0A0C4DH24 114 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CCDC196A0A1B0GTZ2 297 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 NRP1O14786 923 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 SPTBN2O15020 2390 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 ZBTB24O43167 697 aaPredicted RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 LARGE1O95461 756 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 EOMESO95936 686 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CTSAP10619 480 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 PPM1AP35813 382 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 OR1G1P47890 313 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 SCNN1GP51170 649 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 JAK3P52333 1124 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 NTHL1P78549 312 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 LAMTOR4Q0VGL1 99 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 NR5A1Q13285 461 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 MTMR3Q13615 1198 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 KRT32Q14532 448 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 LINC01559Q495D7 138 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 Q4G0T1 1027 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 XKR9Q5GH70 373 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 XKR3Q5GH77 459 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 SPECC1Q5M775 1068 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 ODR4Q5SWX8 454 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 C2orf16Q68DN1 1984 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 PDE12Q6L8Q7 609 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 GLB1LQ6UWU2 654 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 PIK3AP1Q6ZUJ8 805 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CENPQQ7L2Z9 268 aaPredicted RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 DDX53Q86TM3 631 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 SIX5Q8N196 739 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 TDRD5Q8NAT2 981 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 ASAP3Q8TDY4 903 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CEP170P1Q96L14 293 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 MYADMQ96S97 322 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 GAD1Q99259 594 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 RIT2Q99578 217 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 PAAF1Q9BRP4 392 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 RPP25Q9BUL9 199 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 RNF26Q9BY78 433 aaPredicted RBP7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 GLT8D2Q9H1C3 349 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 MFSD1Q9H3U5 465 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 MAN1C1Q9NR34 630 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 MARCH5Q9NX47 278 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CA14Q9ULX7 337 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 SORCS3Q9UPU3 1222 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 COL4A3BPQ9Y5P4 624 aa7.65□□□□□ -1.18
PRPF40B-214ENST00000551320 CCDC195A0A1B0GUA6 201 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 KRBA1A5PL33 1030 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 TEX28O15482 410 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 CCNT1O60563 726 aaKnown RBP7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 CTDNEP1O95476 244 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 DCNP07585 359 aaKnown RBP7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 HMGB1P09429 215 aaKnown RBP7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 SRGAP2BP0DMP2 458 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 HOXB8P17481 243 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 LIG1P18858 919 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 ATP2B1P20020 1258 aa7.64□□□□□ -1.19
PRPF40B-214ENST00000551320 SFPQP23246 707 aaKnown RBP eCLIP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms