RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 GIT1Q9Y2X7 761 aa12.35□□□□□ -0.43
PFDN5-212ENST00000550880 PCDHGA2Q9Y5H1 932 aa12.35□□□□□ -0.43
PFDN5-212ENST00000550880 C2orf16Q68DN1 1984 aa12.35□□□□□ -0.43
PFDN5-212ENST00000550880 NID2Q14112 1375 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 PRR5-ARHGAP8B1AHC4 643 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 INO80B-WBP1J3KQ70 363 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 NCAM2O15394 837 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 XYLBO75191 536 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 EFEMP2O95967 443 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 HNRNPA1P09651 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 YWHABP31946 246 aaKnown RBP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 ARHGAP8P85298 464 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 PPP2R5CQ13362 524 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 UBXN2BQ14CS0 331 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 MLF2Q15773 248 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 SLC44A4Q53GD3 710 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 PPM1LQ5SGD2 360 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 GALNT17Q6IS24 598 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 LILRA6Q6PI73 481 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 RSPO2Q6UXX9 243 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 GRASPQ7Z6J2 395 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 ZFP42Q96MM3 310 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 JAKMIP1Q96N16 626 aaKnown RBP12.34□□□□□ -0.43
PFDN5-212ENST00000550880 NELL2Q99435 816 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 MTRQ99707 1265 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 OSBPL6Q9BZF3 934 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 ADAM28Q9UKQ2 775 aa12.34□□□□□ -0.43
PFDN5-212ENST00000550880 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.439e-9■■■■■ 62.4
PFDN5-212ENST00000550880 WDR81Q562E7 1941 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 POTEMA6NI47 508 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 FAM170BA6NMN3 283 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 TSPAN1O60635 241 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CPA1P15085 419 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 GLULP15104 373 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CCT2P78371 535 aaKnown RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 LMNB2Q03252 620 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 EMC2Q15006 297 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 NTRK3Q16288 839 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 BMP2KLQ5H9B9 411 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 ZBTB41Q5SVQ8 909 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 PDXDC1Q6P996 788 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 KRT25Q7Z3Z0 450 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 C4orf19Q8IY42 314 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 FBXL16Q8N461 479 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 ST13P5Q8NFI4 369 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 FGF14Q92915 247 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CPB2Q96IY4 423 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 B3GALT6Q96L58 329 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 MBOAT7Q96N66 472 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CNTNAP3BQ96NU0 1288 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 GPR62Q9BZJ7 368 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 CDV3Q9UKY7 258 aaKnown RBP12.33□□□□□ -0.44
PFDN5-212ENST00000550880 POLIQ9UNA4 740 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 HES2Q9Y543 173 aa12.33□□□□□ -0.44
PFDN5-212ENST00000550880 EML1O00423 815 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 CPLX1O14810 134 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 DEXIO95424 95 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 RPL17P18621 184 aaKnown RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 PSMA5P28066 241 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 PTENP60484 403 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 GRIK3Q13003 919 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 EPHA7Q15375 998 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 MAML2Q8IZL2 1156 aaPredicted RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 FGF13Q92913 245 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 LXNQ9BS40 222 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 RPP25Q9BUL9 199 aaKnown RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 ZSCAN32Q9NX65 697 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 MIOSQ9NXC5 875 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 MRPS17Q9Y2R5 130 aaKnown RBP12.32□□□□□ -0.44
PFDN5-212ENST00000550880 DNAH14Q0VDD8 3507 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
PFDN5-212ENST00000550880 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 F8W810 466 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 TBC1D4O60343 1298 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 LRRN2O75325 713 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 CDC45O75419 566 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 C8AP07357 584 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
PFDN5-212ENST00000550880 RPS6KB1P23443 525 aa12.31□□□□□ -0.44
PFDN5-212ENST00000550880 AKAP5P24588 427 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms