RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 RABGAP1Q9Y3P9 1069 aa12.37□□□□□ -0.43
DDB1-224ENST00000545894 KIAA0391O15091 583 aaKnown RBP12.36□□□□□ -0.43
DDB1-224ENST00000545894 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDB1-224ENST00000545894 ATP2C2O75185 946 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 CHN1P15882 459 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 HSPA6P17066 643 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 COPB2P35606 906 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 FMO5P49326 533 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 MAPK7Q13164 816 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 NFIL3Q16649 462 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 GADL1Q6ZQY3 521 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
DDB1-224ENST00000545894 ANKS4BQ8N8V4 417 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 GIMAP7Q8NHV1 300 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 GLG1Q92896 1179 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 ARHGEF26Q96DR7 871 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 ZNF317Q96PQ6 595 aaPredicted RBP12.36□□□□□ -0.43
DDB1-224ENST00000545894 P2RX7Q99572 595 aaKnown RBP12.36□□□□□ -0.43
DDB1-224ENST00000545894 MKNK1Q9BUB5 465 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDB1-224ENST00000545894 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 MCM8Q9UJA3 840 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 MMEP08473 750 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 VCAM1P19320 739 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 TNFAIP3P21580 790 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 MMP13P45452 471 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 PLTPP55058 493 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 ZNF211Q13398 564 aaPredicted RBP12.36□□□□□ -0.43
DDB1-224ENST00000545894 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 ZDHHC24Q6UX98 284 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 CROCCP2Q86T23 111 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 LPAR1Q92633 364 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 POLR3CQ9BUI4 534 aaPredicted RBP12.36□□□□□ -0.43
DDB1-224ENST00000545894 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 SNX24Q9Y343 169 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 FRMPD4Q14CM0 1322 aa12.36□□□□□ -0.43
DDB1-224ENST00000545894 CCL15-CCL14A0A0B4J2E2 113 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 ANKRD62A6NC57 917 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 ASAP2O43150 1006 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 AOC2O75106 756 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 FAM13AO94988 1023 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 CETPP11597 493 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 GBP1P32455 592 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 SREBF1P36956 1147 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 CCL15Q16663 113 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 FAM228AQ86W67 206 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 KCTD17Q8N5Z5 321 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 ALG3Q92685 438 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 PTPN18Q99952 460 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 EIF2AK1Q9BQI3 630 aaKnown RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 THAP2Q9H0W7 228 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 TPX2Q9ULW0 747 aaKnown RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 TLDC2A0PJX2 215 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 SFI1A8K8P3 1242 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 MSH4O15457 936 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 RGS16O15492 202 aaPredicted RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 PHF2O75151 1096 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 FOSP01100 380 aaPredicted RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 BMP3P12645 472 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 KRT13P13646 458 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 CHRNA3P32297 505 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 ITIH4Q14624 930 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 FASTKD5Q7L8L6 764 aaKnown RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 MYCT1Q8N699 235 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 FBXO25Q8TCJ0 367 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 AZI2Q9H6S1 392 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 SEPT11Q9NVA2 429 aaKnown RBP12.35□□□□□ -0.43
DDB1-224ENST00000545894 APEX2Q9UBZ4 518 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 COG5Q9UP83 839 aa12.35□□□□□ -0.43
DDB1-224ENST00000545894 SYNGAP1Q96PV0 1343 aa12.34□□□□□ -0.43
DDB1-224ENST00000545894 MANSC4A6NHS7 340 aaPredicted RBP12.34□□□□□ -0.43
DDB1-224ENST00000545894 MIF4GDA9UHW6 222 aaKnown RBP12.34□□□□□ -0.43
DDB1-224ENST00000545894 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
DDB1-224ENST00000545894 AGTP01019 485 aa12.34□□□□□ -0.43
DDB1-224ENST00000545894 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
DDB1-224ENST00000545894 CIITAP33076 1130 aa12.34□□□□□ -0.43
DDB1-224ENST00000545894 PTGIRP43119 386 aa12.34□□□□□ -0.43
DDB1-224ENST00000545894 VEGFBP49765 207 aa12.34□□□□□ -0.43
DDB1-224ENST00000545894 HADHBP55084 474 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms