RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SYKP43405 635 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 STRN3Q13033 797 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 NOMO2Q5JPE7 1267 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 TMEM87AQ8NBN3 555 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 GSTCDQ8NEC7 633 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 FBXO22Q8NEZ5 403 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 MYLIPQ8WY64 445 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 P2RX5Q93086 422 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 HVCN1Q96D96 273 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 PAGE5Q96GU1 130 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 ADPGKQ9BRR6 497 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 TRIM6Q9C030 488 aaPredicted RBP20.99■□□□□ 0.95
DDX55-211ENST00000544429 CDT1Q9H211 546 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 TBC1D13Q9NVG8 400 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 MTUS1Q9ULD2 1270 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 STXBP5LQ9Y2K9 1186 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 GIT1Q9Y2X7 761 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 CITO14578 2027 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 COASYQ13057 564 aa20.98■□□□□ 0.95
DDX55-211ENST00000544429 ZC2HC1CQ53FD0 456 aaPredicted RBP20.98■□□□□ 0.95
DDX55-211ENST00000544429 MPZL3Q6UWV2 235 aa20.98■□□□□ 0.95
DDX55-211ENST00000544429 CCDC65Q8IXS2 484 aa20.98■□□□□ 0.95
DDX55-211ENST00000544429 IPO9Q96P70 1041 aaKnown RBP20.98■□□□□ 0.95
DDX55-211ENST00000544429 HAPLN2Q9GZV7 340 aa20.98■□□□□ 0.95
DDX55-211ENST00000544429 ARL5CA6NH57 179 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 B4GALT3O60512 393 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 MCF2P10911 925 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 IDEP14735 1019 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 CASP1P29466 404 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 CTNNB1P35222 781 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 CASP5P51878 434 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 MCL1Q07820 350 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 CUL4BQ13620 913 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 HERC4Q5GLZ8 1057 aaPredicted RBP20.97■□□□□ 0.95
DDX55-211ENST00000544429 SLC39A4Q6P5W5 647 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 HACE1Q8IYU2 909 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 CEP57L1Q8IYX8 460 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 FMR1NBQ8N0W7 255 aaPredicted RBP20.97■□□□□ 0.95
DDX55-211ENST00000544429 COLGALT1Q8NBJ5 622 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 ENGASEQ8NFI3 743 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 GDPD5Q8WTR4 605 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 ZBTB45Q96K62 511 aaPredicted RBP20.97■□□□□ 0.95
DDX55-211ENST00000544429 ZFP42Q96MM3 310 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 FGFBP2Q9BYJ0 223 aa20.97■□□□□ 0.95
DDX55-211ENST00000544429 PDCD11Q14690 1871 aaKnown RBP20.96■□□□□ 0.95
DDX55-211ENST00000544429 PRUNE2Q8WUY3 3088 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 PVALEFA0A1B0GWK0 134 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 FAM189A1O60320 539 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 ZNF202O95125 648 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 MYL1P05976 194 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 LAG3P18627 525 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 AKAP5P24588 427 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 MLH1P40692 756 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 GRM5P41594 1212 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 AFMP43652 599 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 SNW1Q13573 536 aaKnown RBP20.96■□□□□ 0.95
DDX55-211ENST00000544429 ZNF568Q3ZCX4 644 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 CLEC17AQ6ZS10 378 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 UNC13DQ70J99 1090 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 GRAMD1CQ8IYS0 662 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 GAD1Q99259 594 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 C11orf84Q9BUA3 381 aaPredicted RBP20.96■□□□□ 0.95
DDX55-211ENST00000544429 NRDE2Q9H7Z3 1164 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 MRPL44Q9H9J2 332 aaKnown RBP20.96■□□□□ 0.95
DDX55-211ENST00000544429 MIOSQ9NXC5 875 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 SNTG2Q9NY99 539 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 LMCD1Q9NZU5 365 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 KANSL3Q9P2N6 904 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 STYXL1Q9Y6J8 313 aa20.96■□□□□ 0.95
DDX55-211ENST00000544429 KLRC4O43908 158 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 RECQL4O94761 1208 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 SLC34A2O95436 690 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 ASIC1P78348 528 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 DSC1Q08554 894 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 KCNA1Q09470 495 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 ALCAMQ13740 583 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 TMEM132AQ24JP5 1023 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 XKR4Q5GH76 650 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 KRBA2Q6ZNG9 492 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 EPM2AIP1Q7L775 607 aaPredicted RBP20.95■□□□□ 0.94
DDX55-211ENST00000544429 APBB1IPQ7Z5R6 666 aaPredicted RBP20.95■□□□□ 0.94
DDX55-211ENST00000544429 CEP120Q8N960 986 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 GAS2L1Q99501 681 aaPredicted RBP20.95■□□□□ 0.94
DDX55-211ENST00000544429 BLZF1Q9H2G9 400 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 TBC1D7Q9P0N9 293 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 PLAGL2Q9UPG8 496 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 INPP5FQ9Y2H2 1132 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 MTCH2Q9Y6C9 303 aa20.95■□□□□ 0.94
DDX55-211ENST00000544429 HNRNPDLO14979 420 aaKnown RBP20.94■□□□□ 0.94
DDX55-211ENST00000544429 MEFVO15553 781 aaPredicted RBP20.94■□□□□ 0.94
DDX55-211ENST00000544429 DDHD2O94830 711 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 ITGB1P05556 798 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 MYBP10242 640 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 FOSL2P15408 326 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 GPM6BQ13491 265 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 CAMK1Q14012 370 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 NOLC1Q14978 699 aaKnown RBP eCLIP20.94■□□□□ 0.94
DDX55-211ENST00000544429 CSPP1Q1MSJ5 1256 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 L1TD1Q5T7N2 865 aaKnown RBP20.94■□□□□ 0.94
DDX55-211ENST00000544429 KCNT2Q6UVM3 1135 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms