RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GPS1Q13098 491 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 DCAF15Q66K64 600 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 CYB5D1Q6P9G0 228 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 KCTD6Q8NC69 237 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 PPP4R1Q8TF05 950 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 GBP5Q96PP8 586 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 MSTO1Q9BUK6 570 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 VCX3BQ9H321 246 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 STK32BQ9NY57 414 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 SLIT3O75094 1523 aa8.75□□□□□ -1.01
PRKAB1-207ENST00000542698 A0A0G2JND7 137 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 F8VZ95 297 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 H0Y3Z8 333 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 CES2O00748 559 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 P4HA2O15460 535 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 FECHP22830 423 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 YWHABP31946 246 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SFNP31947 248 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC1A1P43005 524 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 ARL4CP56559 192 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 NFIAQ12857 509 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 NPY5RQ15761 445 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 TTMPQ5BVD1 217 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC13A5Q86YT5 568 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 TRIM42Q8IWZ5 723 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC35C1Q96A29 364 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 TRIM55Q9BYV6 548 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 CXorf56Q9H5V9 222 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 RAVER2Q9HCJ3 691 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 FGFR1OP2Q9NVK5 253 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 POLLQ9UGP5 575 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 LOC102724159A0A0B4J2E5 919 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 INO80B-WBP1J3KQ70 363 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 ZNF263O14978 683 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 ATMINO43313 823 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 MYBL1P10243 752 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 CCND2P30279 289 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 YARSP54577 528 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 RCN2Q14257 317 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 PWP2Q15269 919 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SNRNP35Q16560 246 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 DARS2Q6PI48 645 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 EIF1ADQ8N9N8 165 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 DNAJC19Q96DA6 116 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 C18orf8Q96DM3 657 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 TRIM6Q9C030 488 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 INO80BQ9C086 356 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM53CQ9NYF3 392 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 HESX1Q9UBX0 185 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 GOLGA8MH3BSY2 632 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 DDX3XO00571 662 aaKnown RBP eCLIP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 RARGP13631 454 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 SREBF1P36956 1147 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 PLCB4Q15147 1175 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 MAP7D1Q3KQU3 841 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 RASIP1Q5U651 963 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 STRIP1Q5VSL9 837 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 ZNF720Q7Z2F6 126 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 APBB1IPQ7Z5R6 666 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 COL23A1Q86Y22 540 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 LRRC34Q8IZ02 419 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 IQCKQ8N0W5 287 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.017e-10■■□□□ 12.5
PRKAB1-207ENST00000542698 RIT2Q99578 217 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 ZSWIM1Q9BR11 485 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 DDX23Q9BUQ8 820 aaKnown RBP8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 CD248Q9HCU0 757 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 OLFML3Q9NRN5 406 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 GINM1Q9NU53 330 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 GABBR1Q9UBS5 961 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 DCTN4Q9UJW0 460 aa8.74□□□□□ -1.01
PRKAB1-207ENST00000542698 IQANK1A0A1B0GTG1 560 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SMIM24O75264 130 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SPAG7O75391 227 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SKIP12755 728 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 GNA15P30679 374 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PTENP60484 403 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ZNF844Q08AG5 666 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 TRIM72Q6ZMU5 477 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 TTC13Q8NBP0 860 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 RPS6KC1Q96S38 1066 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 VCPKMTQ9H867 229 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ZWILCHQ9H900 591 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 GTF3C4Q9UKN8 822 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SPATA31A5Q5VU36 1347 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SPATA31A7Q8IWB4 1347 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 GYG2O15488 501 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PSMA2P25787 234 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PDE1BQ01064 536 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 COBLL1Q53SF7 1204 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SEPT14Q6ZU15 432 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 TMC3Q7Z5M5 1100 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ZBTB33Q86T24 672 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 NT5DC3Q86UY8 548 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ZBED8Q8IZ13 594 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms