RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 GIMAP7Q8NHV1 300 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 FAM212AQ96EL1 285 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 TRIM7Q9C029 511 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 WDR64B1ANS9 1081 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 FSBPO95073 299 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 HSD17B3P37058 310 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 KIF22Q14807 665 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 LPAR1Q92633 364 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 TMEM206Q9H813 350 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 BCCIPQ9P287 314 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX55-209ENST00000542286 SEPT9Q9UHD8 586 aaPredicted RBP15.91■□□□□ 0.14
DDX55-209ENST00000542286 DBR1Q9UK59 544 aaKnown RBP15.91■□□□□ 0.14
DDX55-209ENST00000542286 DNAH12Q6ZR08 3092 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 UBE4BO95155 1302 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 CLSTN1O94985 981 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 SP2Q02086 613 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 TMEM132BQ14DG7 1078 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 NLRX1Q86UT6 975 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 EPS8L1Q8TE68 723 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 UBLCP1Q8WVY7 318 aaPredicted RBP15.91■□□□□ 0.14
DDX55-209ENST00000542286 POMGNT1Q8WZA1 660 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 R3HDMLQ9H3Y0 253 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 KMT5AQ9NQR1 393 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 TBC1D22BQ9NU19 505 aa15.91■□□□□ 0.14
DDX55-209ENST00000542286 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 CTNND1O60716 968 aaKnown RBP15.9■□□□□ 0.14
DDX55-209ENST00000542286 TNFRSF8P28908 595 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 SKOR1P84550 965 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 MTERF2Q49AM1 385 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 SPOPLQ6IQ16 392 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 UHMK1Q8TAS1 419 aaKnown RBP15.9■□□□□ 0.14
DDX55-209ENST00000542286 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 TMEM143Q96AN5 459 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 C18orf8Q96DM3 657 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 FAM213AQ9BRX8 229 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 DCDC2CA8MYV0 355 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 BACE1P56817 501 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 C4orf19Q8IY42 314 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 ISCUQ9H1K1 167 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 XPNPEP1Q9NQW7 623 aa15.9■□□□□ 0.14
DDX55-209ENST00000542286 NCANO14594 1321 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 ANKRD62A6NC57 917 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 HNRNPDLO14979 420 aaKnown RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 COMTP21964 271 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 MUTP22033 750 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 RDXP35241 583 aaKnown RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 NCKAP1LP55160 1127 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 CNTN2Q02246 1040 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 ZBTB41Q5SVQ8 909 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 NEK9Q8TD19 979 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 LMBR1Q8WVP7 490 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 BICD1Q96G01 975 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 ZBTB45Q96K62 511 aaPredicted RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 MOV10L1Q9BXT6 1211 aaKnown RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 COL11A1P12107 1806 aaPredicted RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 ATXN2Q99700 1313 aaKnown RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 A0A0A6YYK5 440 aaPredicted RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 CHUKO15111 745 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 KRT5P13647 590 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 PTPRAP18433 802 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 ACOT2P49753 483 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 VSIG10LQ86VR7 867 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 RASGEF1CQ8N431 466 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 PARD3BQ8TEW8 1205 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 NOCTQ9UK39 431 aaKnown RBP15.89■□□□□ 0.13
DDX55-209ENST00000542286 SNX24Q9Y343 169 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 PCDHA10Q9Y5I2 948 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
DDX55-209ENST00000542286 A6NNZ2 444 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 CFHP08603 1231 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 HARSP12081 509 aaKnown RBP15.88■□□□□ 0.13
DDX55-209ENST00000542286 KCNJ1P48048 391 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 FMO1Q01740 532 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 NEDD9Q14511 834 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 TUBB8Q3ZCM7 444 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 SYCE1Q8N0S2 351 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 KCTD17Q8N5Z5 321 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 ZNF668Q96K58 619 aaPredicted RBP15.88■□□□□ 0.13
DDX55-209ENST00000542286 ZNF214Q9UL59 606 aaPredicted RBP15.88■□□□□ 0.13
DDX55-209ENST00000542286 PTPN22Q9Y2R2 807 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 KCNA2P16389 499 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 SF3A3Q12874 501 aaKnown RBP eCLIP15.88■□□□□ 0.137e-10■□□□□ 10.1
DDX55-209ENST00000542286 ALS2CLQ60I27 953 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 SV2AQ7L0J3 742 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 SPATS2Q86XZ4 545 aaKnown RBP15.88■□□□□ 0.13
DDX55-209ENST00000542286 CEP350Q5VT06 3117 aa15.88■□□□□ 0.13
DDX55-209ENST00000542286 SCP2P22307 547 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 SEC24CP53992 1094 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 PRKCEQ02156 737 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 RNF187Q5TA31 235 aaPredicted RBP15.87■□□□□ 0.13
DDX55-209ENST00000542286 ZNF280CQ8ND82 737 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 HELQQ8TDG4 1101 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 TACO1Q9BSH4 297 aaKnown RBP15.87■□□□□ 0.13
DDX55-209ENST00000542286 ATP8A1Q9Y2Q0 1164 aa15.87■□□□□ 0.13
DDX55-209ENST00000542286 PTPRJQ12913 1337 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms