RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SYT11Q9BT88 431 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 ST6GALNAC4Q9H4F1 302 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 SLITRK6Q9H5Y7 841 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 TBC1D22BQ9NU19 505 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 SLC5A4Q9NY91 659 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 RAD51CO43502 376 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 FESP07332 822 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 ITGB5P18084 799 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 TNFAIP3P21580 790 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 COG2Q14746 738 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 KIF22Q14807 665 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 PCNX4Q63HM2 1172 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 NT5DC3Q86UY8 548 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 KCNH7Q9NS40 1196 aa19.3■□□□□ 0.68
RAB40C-203ENST00000535977 WDR46O15213 610 aaKnown RBP19.29■□□□□ 0.68
RAB40C-203ENST00000535977 PMM2O15305 246 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 AHCYL1O43865 530 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 PPP2R2AP63151 447 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
RAB40C-203ENST00000535977 ODF2Q5BJF6 829 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 LNX1Q8TBB1 728 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-203ENST00000535977 NAP1L3Q99457 506 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-203ENST00000535977 UBIAD1Q9Y5Z9 338 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 K7ENM7 598 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 PAEPP09466 180 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 ZBTB48P10074 688 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-203ENST00000535977 BLMHQ13867 455 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 CBWD6Q4V339 395 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 CBWD3Q5JTY5 395 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 CBWD5Q5RIA9 395 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 ARMC3Q5W041 872 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 DAW1Q8N136 415 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 MYH11P35749 1972 aa19.29■□□□□ 0.68
RAB40C-203ENST00000535977 QARSP47897 775 aaKnown RBP19.28■□□□□ 0.68
RAB40C-203ENST00000535977 SLC30A9Q6PML9 568 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 LRIG3Q6UXM1 1119 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 SLC30A10Q6XR72 485 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 KLHL7Q8IXQ5 586 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 FBXO28Q9NVF7 368 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 SLC12A4Q9UP95 1085 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 BHMG1C9JSJ3 638 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-203ENST00000535977 H0YGN5 161 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 PLS3P13797 630 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 HSD17B3P37058 310 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 PDCD2Q16342 344 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-203ENST00000535977 GLYCTKQ8IVS8 523 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 KSR1Q8IVT5 923 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 LRRC45Q96CN5 670 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 AGO4Q9HCK5 861 aaKnown RBP19.28■□□□□ 0.68
RAB40C-203ENST00000535977 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 USP20Q9Y2K6 914 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 NFS1Q9Y697 457 aa19.28■□□□□ 0.68
RAB40C-203ENST00000535977 ZNF536O15090 1300 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 ANKRD62A6NC57 917 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 KRIT1O00522 736 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 HADHBP55084 474 aaKnown RBP19.27■□□□□ 0.68
RAB40C-203ENST00000535977 RNASE9P60153 205 aaKnown RBP19.27■□□□□ 0.68
RAB40C-203ENST00000535977 ZNF844Q08AG5 666 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 SF3A3Q12874 501 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAB40C-203ENST00000535977 TKFCQ3LXA3 575 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 TBC1D25Q3MII6 688 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 RHOT2Q8IXI1 618 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 SLC35G2Q8TBE7 412 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 AGBL1Q96MI9 1066 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 GPR88Q9GZN0 384 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 PGAP2Q9UHJ9 254 aa19.27■□□□□ 0.68
RAB40C-203ENST00000535977 NOC2LQ9Y3T9 749 aaKnown RBP19.27■□□□□ 0.68
RAB40C-203ENST00000535977 A6NHS1 94 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 LIN7AO14910 233 aaPredicted RBP19.27■□□□□ 0.67
RAB40C-203ENST00000535977 DHX15O43143 795 aaKnown RBP19.27■□□□□ 0.67
RAB40C-203ENST00000535977 SART1O43290 800 aaKnown RBP19.27■□□□□ 0.67
RAB40C-203ENST00000535977 UPP2O95045 317 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 VAMP7P51809 220 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 TCEAL1Q15170 157 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 CLEC4DQ8WXI8 215 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 FAM167BQ9BTA0 163 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 ZHX2Q9Y6X8 837 aa19.27■□□□□ 0.67
RAB40C-203ENST00000535977 NEFHP12036 1026 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 ABL2P42684 1182 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 RARRES1P49788 294 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 MCCD1P59942 119 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-203ENST00000535977 PPATQ06203 517 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 CCDC197Q8NCU1 140 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 ZBED3Q96IU2 234 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-203ENST00000535977 IKZF4Q9H2S9 585 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 EIF4E1BA6NMX2 242 aaKnown RBP19.26■□□□□ 0.67
RAB40C-203ENST00000535977 DCDC2CA8MYV0 355 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 RTN3O95197 1032 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-203ENST00000535977 TRIM49P0CI25 452 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 TRIM49CP0CI26 452 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 FDX1P10109 184 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 UAP1Q16222 522 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-203ENST00000535977 CWF19L1Q69YN2 538 aaKnown RBP19.26■□□□□ 0.67
RAB40C-203ENST00000535977 C4orf19Q8IY42 314 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 XXYLT1Q8NBI6 393 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 OLIG1Q8TAK6 271 aa19.26■□□□□ 0.67
RAB40C-203ENST00000535977 NOVA2Q9UNW9 492 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms