RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 GJB1P08034 283 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 PLTPP55058 493 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 PDCLQ13371 301 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 STXBP2Q15833 593 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 C10orf76Q5T2E6 689 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 LRRC57Q8N9N7 239 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 SLC7A3Q8WY07 619 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 TRIM7Q9C029 511 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 DBR1Q9UK59 544 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 MFAP3P55082 362 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 IFFO1Q0D2I5 559 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 EMC2Q15006 297 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 MIS18BP1Q6P0N0 1132 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 FBXL13Q8NEE6 735 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 ALG3Q92685 438 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 KLRG1Q96E93 195 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 CCDC113Q9H0I3 377 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 GTPBP10A4D1E9 387 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 GOLGA6L10A6NI86 522 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 NOP56O00567 594 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 COMTP21964 271 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 FLT3P36888 993 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 NLRP11P59045 1033 aaKnown RBP17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 DRP2Q13474 957 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 UBXN6Q9BZV1 441 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 C1orf112Q9NSG2 853 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 RAB20Q9NX57 234 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 CTNNA1P35221 906 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 GNGT1P63211 74 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 GTF2BQ00403 316 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 C1orf220Q5T0J3 134 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 KLHL11Q9NVR0 708 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 KCNA2P16389 499 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 NNTQ13423 1086 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 WDR44Q5JSH3 913 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 PBKQ96KB5 322 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 NLRP4Q96MN2 994 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 IWS1Q96ST2 819 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 XPNPEP1Q9NQW7 623 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 PFASO15067 1338 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 ANKRD62A6NC57 917 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 ZNF233A6NK53 670 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 TMEM270Q6UE05 265 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 MAGOHBQ96A72 148 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 MSTO1Q9BUK6 570 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 HEMGNQ9BXL5 484 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-224ENST00000533801 GOLGA6L10A0A0M3HER8 536 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 SLC39A4Q6P5W5 647 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 THNSL1Q8IYQ7 743 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 GGPS1O95749 300 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 TMEM253P0C7T8 217 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 GPC5P78333 572 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 CCDC105Q8IYK2 499 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 ZNF564Q8TBZ8 553 aaPredicted RBP17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 C18orf8Q96DM3 657 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 C11orf70Q9BRQ4 267 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 CNOT8Q9UFF9 292 aaKnown RBP17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 CD2APQ9Y5K6 639 aa17.13■□□□□ 0.33
ATP2C1-224ENST00000533801 IRF6O14896 467 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 OPA1O60313 960 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 DHX9Q08211 1270 aaKnown RBP17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 SUPT20HL1Q3ZLR7 823 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 EMBQ6PCB8 327 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 CATSPERGQ6ZRH7 1159 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 EPS8L1Q8TE68 723 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 KIFAP3Q92845 792 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 DGAT1O75907 488 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 KRT19P08727 400 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 ACTN2P35609 894 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 WNT7BP56706 349 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 C10orf67Q8IYJ2 551 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 AGO2Q9UKV8 859 aaKnown RBP17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 UBE4BO95155 1302 aa17.12■□□□□ 0.33
ATP2C1-224ENST00000533801 CYP11B1P15538 503 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms