RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NCAM2O15394 837 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 POU2F2P09086 479 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 CYP3A7P24462 503 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 ADD1P35611 737 aaKnown RBP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 GPC5P78333 572 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 UBXN2BQ14CS0 331 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 LIN9Q5TKA1 542 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 FUT10Q6P4F1 479 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 NOTUMQ6P988 496 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 SMG8Q8ND04 991 aaKnown RBP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 NELL2Q99435 816 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 DHX33Q9H6R0 707 aaKnown RBP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 LTB4R2Q9NPC1 389 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 SH3GLB2Q9NR46 395 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
CAPN1-223ENST00000533079 TDRD15B5MCY1 1934 aaKnown RBP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 SF3B1O75533 1304 aaKnown RBP eCLIP13.88□□□□□ -0.19
CAPN1-223ENST00000533079 ASAP2O43150 1006 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 EDIL3O43854 480 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 ADRB1P08588 477 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 SPATA31D3P0C874 917 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 SCNN1GP51170 649 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 FGD1P98174 961 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 CSTF1Q05048 431 aaKnown RBP13.87□□□□□ -0.19
CAPN1-223ENST00000533079 GRIK3Q13003 919 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
CAPN1-223ENST00000533079 ST3GAL2Q16842 350 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 ZBTB41Q5SVQ8 909 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 PARM1Q6UWI2 310 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 SPATA31D4Q6ZUB0 917 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 GAD1Q99259 594 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 IER2Q9BTL4 223 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 MINDY3Q9H8M7 445 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 PRMT8Q9NR22 394 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-223ENST00000533079 GMEB2Q9UKD1 530 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-223ENST00000533079 CEP250Q9BV73 2442 aa13.87□□□□□ -0.19
CAPN1-223ENST00000533079 ARID2Q68CP9 1835 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 XYLBO75191 536 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 LRRN2O75325 713 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 QARSP47897 775 aaKnown RBP13.86□□□□□ -0.19
CAPN1-223ENST00000533079 LAMTOR4Q0VGL1 99 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 PPP2R5DQ14738 602 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 SLC44A4Q53GD3 710 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 PLA2G4FQ68DD2 849 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 PDXDC1Q6P996 788 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 GRASPQ7Z6J2 395 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-223ENST00000533079 PRPF31Q8WWY3 499 aaKnown RBP13.86□□□□□ -0.19
CAPN1-223ENST00000533079 FGF13Q92913 245 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 CLDN23Q96B33 292 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 PHF20Q9BVI0 1012 aa13.86□□□□□ -0.19
CAPN1-223ENST00000533079 MRPS17Q9Y2R5 130 aaKnown RBP13.86□□□□□ -0.19
CAPN1-223ENST00000533079 CACNA1BQ00975 2339 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 FAM170BA6NMN3 283 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 TSPAN1O60635 241 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 LRP3O75074 770 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 SRGAP2CP0DJJ0 459 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 MYBP10242 640 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 PPP2R5CQ13362 524 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-223ENST00000533079 RTL10Q7L3V2 364 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 FERMT3Q86UX7 667 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 FAM177A1Q8N128 213 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-223ENST00000533079 RNF149Q8NC42 400 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 NETO1Q8TDF5 533 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 EIF2AQ9BY44 585 aaKnown RBP13.85□□□□□ -0.19
CAPN1-223ENST00000533079 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 TRIM6Q9C030 488 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-223ENST00000533079 CSRNP2Q9H175 543 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 KCNH3Q9ULD8 1083 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 USP18Q9UMW8 372 aa13.85□□□□□ -0.19
CAPN1-223ENST00000533079 F8W810 466 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 TDP2O95551 362 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 P4HBP07237 508 aaKnown RBP13.84□□□□□ -0.19
CAPN1-223ENST00000533079 C8AP07357 584 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 NRLP54845 237 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 POU5F1BQ06416 359 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 EMC2Q15006 297 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 ADCK5Q3MIX3 580 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 PPM1LQ5SGD2 360 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-223ENST00000533079 GLYCTKQ8IVS8 523 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 FBXL16Q8N461 479 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 PIK3R5Q8WYR1 880 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 DNASE1L2Q92874 299 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 GJA10Q969M2 543 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 B3GALT6Q96L58 329 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 ZFP42Q96MM3 310 aa13.84□□□□□ -0.19
CAPN1-223ENST00000533079 RPP25Q9BUL9 199 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms