RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 KANK3Q6NY19 840 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 C1orf186Q6ZWK4 172 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 SYT2Q8N9I0 419 aaPredicted RBP21.07■□□□□ 0.96
PKP3-204ENST00000526971 LPPQ93052 612 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 RUSC1Q9BVN2 902 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 ZBP1Q9H171 429 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 POLD4Q9HCU8 107 aa21.07■□□□□ 0.96
PKP3-204ENST00000526971 TSPAN1O60635 241 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 BRD1O95696 1058 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 F13A1P00488 732 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 SKIP12755 728 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 NAMPTP43490 491 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 RAB27AP51159 221 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 NCBP1Q09161 790 aaKnown RBP21.06■□□□□ 0.96
PKP3-204ENST00000526971 PKP1Q13835 747 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 PPP2R5AQ15172 486 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 AMHR2Q16671 573 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 LONRF3Q496Y0 759 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 CDCA2Q69YH5 1023 aaPredicted RBP21.06■□□□□ 0.96
PKP3-204ENST00000526971 ZBTB33Q86T24 672 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 C12orf76Q8N812 135 aaPredicted RBP21.06■□□□□ 0.96
PKP3-204ENST00000526971 RIPOR3Q96MK2 946 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 MRPL9Q9BYD2 267 aaKnown RBP21.06■□□□□ 0.96
PKP3-204ENST00000526971 CCSER1Q9C0I3 900 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 FAM105AQ9NUU6 356 aa21.06■□□□□ 0.96
PKP3-204ENST00000526971 VPS13AQ96RL7 3174 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 B4GALT3O60512 393 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 ZNF623O75123 536 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 ZC3H11AO75152 810 aaKnown RBP eCLIP21.05■□□□□ 0.96
PKP3-204ENST00000526971 SSBP05455 408 aaKnown RBP eCLIP21.05■□□□□ 0.96
PKP3-204ENST00000526971 PLA2G4BP0C869 781 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 AXLP30530 894 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 SLC12A3P55017 1021 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 TPRNQ4KMQ1 711 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 RARS2Q5T160 578 aaKnown RBP21.05■□□□□ 0.96
PKP3-204ENST00000526971 ZBTB8OSQ8IWT0 167 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 VPS52Q8N1B4 723 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 LINC00301Q8NCQ3 95 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 EPSTI1Q96J88 318 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 IFT74Q96LB3 600 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 CLIC6Q96NY7 704 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 VN1R3Q9BXE9 311 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 C2orf40Q9H1Z8 148 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 TFIP11Q9UBB9 837 aaKnown RBP21.05■□□□□ 0.96
PKP3-204ENST00000526971 NR2E1Q9Y466 385 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 ARID2Q68CP9 1835 aa21.05■□□□□ 0.96
PKP3-204ENST00000526971 DMDP11532 3685 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.04■□□□□ 0.96
PKP3-204ENST00000526971 HIP1RO75146 1068 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 CXCL14O95715 111 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 EPCAMP16422 314 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 GUCY2CP25092 1073 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 CA8P35219 290 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 ITIH3Q06033 890 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 BECN1Q14457 450 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 KARSQ15046 597 aaKnown RBP21.04■□□□□ 0.96
PKP3-204ENST00000526971 STK38Q15208 465 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 SPECC1Q5M775 1068 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 UBXN11Q5T124 520 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 USP49Q70CQ1 688 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 DAW1Q8N136 415 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 KRI1Q8N9T8 703 aaKnown RBP21.04■□□□□ 0.96
PKP3-204ENST00000526971 RASSF8Q8NHQ8 419 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 DEPTORQ8TB45 409 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 CCDC51Q96ER9 411 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 TMEM169Q96HH4 297 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 NECTIN4Q96NY8 510 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 TIPINQ9BVW5 301 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 FZD8Q9H461 694 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 NRDE2Q9H7Z3 1164 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 TBC1D13Q9NVG8 400 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 PCDHB2Q9Y5E7 798 aa21.04■□□□□ 0.96
PKP3-204ENST00000526971 ASGR2P07307 311 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 PLCG1P19174 1290 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 ALDH7A1P49419 539 aaKnown RBP21.03■□□□□ 0.96
PKP3-204ENST00000526971 MAPK7Q13164 816 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 MTMR3Q13615 1198 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 FAM187BQ17R55 369 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 CES5AQ6NT32 575 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 NOTUMQ6P988 496 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 MRPL10Q7Z7H8 261 aaKnown RBP21.03■□□□□ 0.96
PKP3-204ENST00000526971 LRRC15Q8TF66 581 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 CPB2Q96IY4 423 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 DRC1Q96MC2 740 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 PRMT7Q9NVM4 692 aaPredicted RBP21.03■□□□□ 0.96
PKP3-204ENST00000526971 KCND2Q9NZV8 630 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 SORCS3Q9UPU3 1222 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 SPTBN4Q9H254 2564 aa21.03■□□□□ 0.96
PKP3-204ENST00000526971 RIF1Q5UIP0 2472 aaKnown RBP21.03■□□□□ 0.96
PKP3-204ENST00000526971 PTPRZ1P23471 2315 aaPredicted RBP21.03■□□□□ 0.96
PKP3-204ENST00000526971 SPTLC2O15270 562 aa21.02■□□□□ 0.96
PKP3-204ENST00000526971 B4GALT5O43286 388 aa21.02■□□□□ 0.96
PKP3-204ENST00000526971 GFRA3O60609 400 aa21.02■□□□□ 0.96
PKP3-204ENST00000526971 YEATS4O95619 227 aa21.02■□□□□ 0.96
PKP3-204ENST00000526971 ARF4P18085 180 aaPredicted RBP21.02■□□□□ 0.96
PKP3-204ENST00000526971 FOXD4L6Q3SYB3 417 aaPredicted RBP21.02■□□□□ 0.96
PKP3-204ENST00000526971 KIAA1841Q6NSI8 718 aa21.02■□□□□ 0.96
PKP3-204ENST00000526971 FOXD4L3Q6VB84 417 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms