RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 HNRNPLP14866 589 aaKnown RBP eCLIP3.99□□□□□ -1.77
COPB1-205ENST00000526527 SLC9A1P19634 815 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 BCAR1P56945 870 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 SLFN12LQ6IEE8 588 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 MFSD5Q6N075 450 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 OLFML1Q6UWY5 402 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 FTSJ3Q8IY81 847 aaKnown RBP3.99□□□□□ -1.77
COPB1-205ENST00000526527 SYNE4Q8N205 404 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 PRPF38AQ8NAV1 312 aaKnown RBP3.99□□□□□ -1.77
COPB1-205ENST00000526527 MDGA1Q8NFP4 955 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 PROKR1Q8TCW9 393 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 IPO4Q8TEX9 1081 aaKnown RBP3.99□□□□□ -1.77
COPB1-205ENST00000526527 ARL8AQ96BM9 186 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 DYDC2Q96IM9 177 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 WDR92Q96MX6 357 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 TUBGCP5Q96RT8 1024 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 ELF4Q99607 663 aaPredicted RBP3.99□□□□□ -1.77
COPB1-205ENST00000526527 HOMER2Q9NSB8 354 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 KCMF1Q9P0J7 381 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 NAP1L2Q9ULW6 460 aaPredicted RBP3.99□□□□□ -1.77
COPB1-205ENST00000526527 FZD1Q9UP38 647 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 RIPOR2Q9Y4F9 1068 aa3.99□□□□□ -1.77
COPB1-205ENST00000526527 GRID2IPA4D2P6 1211 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 FAM83GA6ND36 823 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 NEMP1O14524 444 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 KDM1AO60341 852 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 NRP2O60462 931 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 STC2O76061 302 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 IPO13O94829 963 aaKnown RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 JUNP05412 331 aaKnown RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 ITGB1P05556 798 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 XPAP23025 273 aaPredicted RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 LY6G5CQ5SRR4 150 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 GJC2Q5T442 439 aaPredicted RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 RASSF3Q86WH2 238 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 DDX42Q86XP3 938 aaKnown RBP eCLIP3.98□□□□□ -1.77
COPB1-205ENST00000526527 AMOTL1Q8IY63 956 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 RSAD2Q8WXG1 361 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 ANP32BQ92688 251 aaKnown RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 PAWRQ96IZ0 340 aaKnown RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 HAPLN2Q9GZV7 340 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 SPTLC3Q9NUV7 552 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 POLR3BQ9NW08 1133 aaPredicted RBP3.98□□□□□ -1.77
COPB1-205ENST00000526527 SLC5A4Q9NY91 659 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 NCDNQ9UBB6 729 aa3.98□□□□□ -1.77
COPB1-205ENST00000526527 LOC102724159A0A0B4J2E5 919 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 TPD52L2O43399 206 aaKnown RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 APOL3O95236 402 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 ABHD16AO95870 558 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 MTHFD2P13995 350 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 HK1P19367 917 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 CTGFP29279 349 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 DEKP35659 375 aaKnown RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 KIR2DL3P43628 341 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 GUCY2FP51841 1108 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 ADCY2Q08462 1091 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 SPIDRQ14159 915 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 FAM50AQ14320 339 aaKnown RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 PTPAQ15257 358 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 PWP2Q15269 919 aaKnown RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 TERF2Q15554 542 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 WDR78Q5VTH9 848 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 BROXQ5VW32 411 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 NAIF1Q69YI7 327 aaPredicted RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 KIAA1841Q6NSI8 718 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 BMP8AQ7Z5Y6 402 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 CXorf67Q86X51 503 aaPredicted RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 CMTM4Q8IZR5 234 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 ST8SIA2Q92186 375 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 AHCYL2Q96HN2 611 aaKnown RBP3.97□□□□□ -1.77
COPB1-205ENST00000526527 HIST1H2AHQ96KK5 128 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 C16orf92Q96LL3 132 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 HIST1H2AJQ99878 128 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 TOR3AQ9H497 397 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 MSRAQ9UJ68 235 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 SORCS3Q9UPU3 1222 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 HS3ST4Q9Y661 456 aa3.97□□□□□ -1.77
COPB1-205ENST00000526527 KIAA0355O15063 1070 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 DAPK3O43293 454 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MARCH6O60337 910 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 EYA4O95677 639 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 CFBP00751 764 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 GNAT2P19087 354 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 PTX3P26022 381 aaPredicted RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 ZFP36P26651 326 aaKnown RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 CLK3P49761 638 aaKnown RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 PTTG1IPP53801 180 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 NPEPPSP55786 919 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 NRG3P56975 720 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
COPB1-205ENST00000526527 FAM193AP78312 1265 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 AMPD3Q01432 767 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MYBPC3Q14896 1274 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 MAN2A1Q16706 1144 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 FAM214AQ32MH5 1076 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 CCDC178Q5BJE1 867 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 CREB3L3Q68CJ9 461 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 KCNV1Q6PIU1 500 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 LRRC55Q6ZSA7 311 aa3.96□□□□□ -1.78
COPB1-205ENST00000526527 STRA8Q7Z7C7 330 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms