RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SPAG7O75391 227 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 E2F6O75461 281 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 USP1O94782 785 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 POLD1P28340 1107 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TRAPPC10P48553 1259 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 CTSWP56202 376 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ALX1Q15699 326 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ISLR2Q6UXK2 745 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SLFN11Q7Z7L1 901 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MTDHQ86UE4 582 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MAGEB6Q8N7X4 407 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ENAHQ8N8S7 591 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 STMN2Q93045 179 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 OLFM3Q96PB7 478 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 C7orf25Q9BPX7 421 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SIKE1Q9BRV8 207 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MIS12Q9H081 205 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 USP40Q9NVE5 1235 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 NKIRAS1Q9NYS0 192 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 AMFRQ9UKV5 643 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 UMODL1Q5DID0 1318 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 FAM187AA6NFU0 413 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TMEM110-MUSTN1A8MSY1 372 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 MINDY4BA8MYZ0 360 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 POTEJP0CG39 1038 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 HARSP12081 509 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 RARGP13631 454 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 OXCT1P55809 520 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SULT2A1Q06520 285 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 R3HDM1Q15032 1099 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 CROCCP2Q86T23 111 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 ST13P4Q8IZP2 240 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 TMTC2Q8N394 836 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 LCORLQ8N3X6 602 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 C10orf82Q8WW14 230 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 LZICQ8WZA0 190 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 GRAMD1AQ96CP6 724 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 CDK5RAP3Q96JB5 506 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 CATSPER2Q96P56 530 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 POP1Q99575 1024 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 EBF3Q9H4W6 596 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 METTL14Q9HCE5 456 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 PFDN4Q9NQP4 134 aa10.88□□□□□ -0.67
SPIDR-224ENST00000524126 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
SPIDR-224ENST00000524126 SRCAPQ6ZRS2 3230 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 TRAFD1O14545 582 aaPredicted RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 DCTN3O75935 186 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 CSF1RP07333 972 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 PABPC4LP0CB38 370 aaKnown RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 GNAT2P19087 354 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 PHEXP78562 749 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 STRN3Q13033 797 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 IFIT5Q13325 482 aaKnown RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 INF2Q27J81 1249 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 SLC44A4Q53GD3 710 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 IRF2BP2Q7Z5L9 587 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 CCDC125Q86Z20 511 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 SCYL3Q8IZE3 742 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 HSPBAP1Q96EW2 488 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 PRR11Q96HE9 360 aaPredicted RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 CYTH2Q99418 400 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 CCSER1Q9C0I3 900 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 BRD8Q9H0E9 1235 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 GANQ9H2C0 597 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 SYNCQ9H7C4 482 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ARL8BQ9NVJ2 186 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 SUN2Q9UH99 717 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 RASAL2Q9UJF2 1139 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 AKAP11Q9UKA4 1901 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 IGSF9BQ9UPX0 1349 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ERVV-1B6SEH8 477 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 GSC2O15499 205 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ZNF862O60290 1169 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 PGM3O95394 542 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ASMTLO95671 621 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 CHKAP35790 457 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 PHKA1P46020 1223 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 VPS41P49754 854 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 CCDC92Q53HC0 331 aaPredicted RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ARHGEF18Q6ZSZ5 1173 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 TMTC3Q6ZXV5 915 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ZDHHC14Q8IZN3 488 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 NME8Q8N427 588 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 U2AF1L4Q8WU68 220 aaKnown RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 MKL1Q969V6 931 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ECSITQ9BQ95 431 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ROPN1BQ9BZX4 212 aaPredicted RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 ROPN1Q9HAT0 212 aaPredicted RBP10.87□□□□□ -0.67
SPIDR-224ENST00000524126 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 TMEM98Q9Y2Y6 226 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 STARD13Q9Y3M8 1113 aa10.87□□□□□ -0.67
SPIDR-224ENST00000524126 RTL9Q8NET4 1388 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms