RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 ATF7IP2Q5U623 682 aa29.6■■■□□ 2.33
TRNP1-201ENST00000522111 RRAGAQ7L523 313 aa29.6■■■□□ 2.33
TRNP1-201ENST00000522111 PARD3BQ8TEW8 1205 aa29.6■■■□□ 2.33
TRNP1-201ENST00000522111 MFSD14AQ96MC6 490 aa29.6■■■□□ 2.33
TRNP1-201ENST00000522111 LRRIQ3A6PVS8 624 aaPredicted RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 ARHGAP6O43182 974 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 ZNF500O60304 480 aaPredicted RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 POU5F1BQ06416 359 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 KCNA10Q16322 511 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 TSR1Q2NL82 804 aaKnown RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 NBPF20Q3BBV1 942 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 CRELD2Q6UXH1 353 aaPredicted RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 IQCDQ96DY2 449 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 FAM84AQ96KN4 292 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 BEGAINQ9BUH8 593 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 PRMT7Q9NVM4 692 aaPredicted RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 DDX20Q9UHI6 824 aaKnown RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 SCN10AQ9Y5Y9 1956 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 SMIM35A0A1B0GVV1 85 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 GTPBP10A4D1E9 387 aaKnown RBP29.59■■■□□ 2.33
TRNP1-201ENST00000522111 LRRC53A6NM62 1247 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 ARHGEF6Q15052 776 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 FAM47CQ5HY64 1035 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 KIAA1586Q9HCI6 787 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 CEP72Q9P209 647 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 PTCH2Q9Y6C5 1203 aa29.59■■■□□ 2.33
TRNP1-201ENST00000522111 USP27XA6NNY8 438 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 FGFR4P22455 802 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 WNT7BP56706 349 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 NOLC1Q14978 699 aaKnown RBP eCLIP29.58■■■□□ 2.33
TRNP1-201ENST00000522111 ZNF568Q3ZCX4 644 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 TSHZ1Q6ZSZ6 1077 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 CPB2Q96IY4 423 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 GANQ9H2C0 597 aa29.58■■■□□ 2.33
TRNP1-201ENST00000522111 TRMT1Q9NXH9 659 aaKnown RBP29.58■■■□□ 2.33
TRNP1-201ENST00000522111 RBAKQ9NYW8 714 aaPredicted RBP29.58■■■□□ 2.33
TRNP1-201ENST00000522111 KIAA0391O15091 583 aaKnown RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 EEF1DP3Q658K8 133 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 E4F1Q66K89 784 aaPredicted RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 TRIM65Q6PJ69 517 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 WDR59Q6PJI9 974 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 IFNLR1Q8IU57 520 aaPredicted RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 BAP1Q92560 729 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 CHP1Q99653 195 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 NAA15Q9BXJ9 866 aaKnown RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 CDHR5Q9HBB8 845 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 ABLIM1O14639 778 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 LDHAP00338 332 aaKnown RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 TNFSF9P41273 254 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 MXI1P50539 228 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 MAP2K1Q02750 393 aaPredicted RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 AMHR2Q16671 573 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 LMBRD2Q68DH5 695 aaPredicted RBP29.57■■■□□ 2.32
TRNP1-201ENST00000522111 DPY19L2P1Q6NXN4 242 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 GJB7Q6PEY0 223 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 MPZL3Q6UWV2 235 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 ZNF410Q86VK4 478 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 SLAIN1Q8ND83 568 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 OSMRQ99650 979 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 TMEM117Q9H0C3 514 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 SIX2Q9NPC8 291 aa29.57■■■□□ 2.32
TRNP1-201ENST00000522111 GNAT1P11488 350 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 GRK4P32298 578 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 KLHDC7AQ5VTJ3 777 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 RAD9BQ6WBX8 426 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 TOGARAM2Q6ZUX3 1019 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 KLHDC9Q8NEP7 349 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 DESI2Q9BSY9 194 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 ADAMTS10Q9H324 1103 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 PDE11AQ9HCR9 933 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 PLCB1Q9NQ66 1216 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.56■■■□□ 2.32
TRNP1-201ENST00000522111 FHOD1Q9Y613 1164 aa29.56■■■□□ 2.32
TRNP1-201ENST00000522111 LRRN2O75325 713 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 GPR32O75388 356 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 UCHL3P15374 230 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 NKX3-2P78367 333 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 MCL1Q07820 350 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 TMC2Q8TDI7 906 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 INTS2Q9H0H0 1204 aaKnown RBP29.55■■■□□ 2.32
TRNP1-201ENST00000522111 PTPRHQ9HD43 1115 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 FAM189A1O60320 539 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 ERLIN2O94905 339 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 FECHP22830 423 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 PROZP22891 400 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 HOXC8P31273 242 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 OSTNP61366 133 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 CYP26C1Q6V0L0 522 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 USP37Q86T82 979 aa29.55■■■□□ 2.32
TRNP1-201ENST00000522111 ZNHIT6Q9NWK9 470 aaKnown RBP29.55■■■□□ 2.32
TRNP1-201ENST00000522111 AJAP1Q9UKB5 411 aaPredicted RBP29.55■■■□□ 2.32
TRNP1-201ENST00000522111 CNTNAP2Q9UHC6 1331 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 FAM187BQ17R55 369 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 PDXDC1Q6P996 788 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 THNSL1Q8IYQ7 743 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 CEP120Q8N960 986 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 SH3TC2Q8TF17 1288 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 FNBP1Q96RU3 617 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 GTF2IRD1Q9UHL9 959 aa29.54■■■□□ 2.32
TRNP1-201ENST00000522111 N4BP1O75113 896 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms